RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 APOBEC3BQ9UH17 382 aaKnown RBP14.56□□□□□ -0.08
NUP88-207ENST00000573584 WDR45Q9Y484 360 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 TRAV6A0A075B6T7 132 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 UNC119BA6NIH7 251 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 REM1O75628 298 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 DHFRP00374 187 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 ASGR2P07307 311 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 IFI30P13284 250 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 RBMS1P29558 406 aaKnown RBP14.56□□□□□ -0.08
NUP88-207ENST00000573584 THBS2P35442 1172 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 CEBPEQ15744 281 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 HEPHL1Q6MZM0 1159 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 SFXN4Q6P4A7 337 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 FAM111BQ6SJ93 734 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 AMIGO1Q86WK6 493 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 FAM109AQ8N4B1 249 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 LRRC17Q8N6Y2 441 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 OR2L3Q8NG85 312 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 OR52E1Q8NGJ3 308 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 ANGPTL6Q8NI99 470 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 AHCYL2Q96HN2 611 aaKnown RBP14.56□□□□□ -0.08
NUP88-207ENST00000573584 MED30Q96HR3 178 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 HCAR1Q9BXC0 346 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 ZNF624Q9P2J8 865 aaPredicted RBP14.56□□□□□ -0.08
NUP88-207ENST00000573584 CACNG2Q9Y698 323 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 C5orf42Q9H799 3197 aa14.56□□□□□ -0.08
NUP88-207ENST00000573584 NFATC1O95644 943 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 CRYZL1O95825 349 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 CLTBP09497 229 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 NPR2P20594 1047 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 TEAD1P28347 426 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 SLC16A1P53985 500 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 BTN3A2P78410 334 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 GALEQ14376 348 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 ARHGEF6Q15052 776 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 NTRK2Q16620 822 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 CEACAM19Q7Z692 300 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 REM2Q8IYK8 340 aaPredicted RBP14.55□□□□□ -0.08
NUP88-207ENST00000573584 ELMOD2Q8IZ81 293 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 GHDCQ8N2G8 530 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 OR7G2Q8NG99 324 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 OR52L1Q8NGH7 329 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 FANK1Q8TC84 345 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 BRIX1Q8TDN6 353 aaKnown RBP14.55□□□□□ -0.08
NUP88-207ENST00000573584 ABHD1Q96SE0 405 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 CD180Q99467 661 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 TEX101Q9BY14 249 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 ENKD1Q9H0I2 346 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 PIGUQ9H490 435 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 NUDT15Q9NV35 164 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 STMN3Q9NZ72 180 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 ING4Q9UNL4 249 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 A0A1W2PQ72 361 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 E9PI62 339 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 BMP7P18075 431 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 SRP9P49458 86 aaKnown RBP14.55□□□□□ -0.08
NUP88-207ENST00000573584 RPS7P62081 194 aaKnown RBP14.55□□□□□ -0.08
NUP88-207ENST00000573584 SLC3A1Q07837 685 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 ANGPT1Q15389 498 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 PRPF38BQ5VTL8 546 aaKnown RBP14.55□□□□□ -0.08
NUP88-207ENST00000573584 MFSD12Q6NUT3 480 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 ZNF836Q6ZNA1 936 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 RFPL4BQ6ZWI9 263 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 NRROSQ86YC3 692 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 OR8H1Q8NGG4 311 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 TTC9Q92623 222 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 RAB11FIP5Q9BXF6 653 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 MKRN2Q9H000 416 aaKnown RBP14.55□□□□□ -0.08
NUP88-207ENST00000573584 PRSS16Q9NQE7 514 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 SIDT1Q9NXL6 827 aaKnown RBP14.55□□□□□ -0.08
NUP88-207ENST00000573584 SPHK1Q9NYA1 384 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 PLEKHM1Q9Y4G2 1056 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 LTBP2Q14767 1821 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 TBC1D3BA6NDS4 549 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 FKTNO75072 461 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 RFPL3O75679 317 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 MT-ND5P03915 603 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 PRMT2P55345 433 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 FXYD6P3P58550 94 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 FN3KQ9H479 309 aa14.55□□□□□ -0.08
NUP88-207ENST00000573584 BTCP35070 178 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 MNX1P50219 401 aaPredicted RBP14.54□□□□□ -0.08
NUP88-207ENST00000573584 SHC2P98077 582 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 E2F1Q01094 437 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 DEFB115Q30KQ5 88 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 TIGD4Q8IY51 512 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 ABHD4Q8TB40 342 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 HS6ST2Q96MM7 605 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 PRSS27Q9BQR3 290 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 NDC1Q9BTX1 674 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 DIABLOQ9NR28 239 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 KLHL1Q9NR64 748 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 C20orf141Q9NUB4 165 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 ZNF222Q9UK12 451 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 CENPVL1A0A0U1RR11 272 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 BHLHE40O14503 412 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 PRICKLE3O43900 615 aaPredicted RBP14.54□□□□□ -0.08
NUP88-207ENST00000573584 PAK4O96013 591 aaPredicted RBP14.54□□□□□ -0.08
NUP88-207ENST00000573584 PRG2P13727 222 aa14.54□□□□□ -0.08
NUP88-207ENST00000573584 MAKP20794 623 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms