RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 RPTNQ6XPR3 784 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 B3GNT6Q6ZMB0 384 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 MSANTD1Q6ZTZ1 278 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 NCCRP1Q6ZVX7 275 aaPredicted RBP7.07□□□□□ -1.28
SMG6-211ENST00000572369 CHMP1BQ7LBR1 199 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 ZAR1Q86SH2 424 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 RNF130Q86XS8 419 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 CHERPQ8IWX8 916 aaKnown RBP7.07□□□□□ -1.28
SMG6-211ENST00000572369 PM20D2Q8IYS1 436 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 ZNF808Q8N4W9 903 aaPredicted RBP7.07□□□□□ -1.28
SMG6-211ENST00000572369 TMCO5AQ8N6Q1 288 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 OR4C3Q8NH37 302 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 GOT1L1Q8NHS2 421 aaPredicted RBP7.07□□□□□ -1.28
SMG6-211ENST00000572369 RFWD2Q8NHY2 731 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 FAM110BQ8TC76 370 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 PNPT1Q8TCS8 783 aaKnown RBP7.07□□□□□ -1.28
SMG6-211ENST00000572369 CA5BP1Q8WTZ4 195 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 PHF10Q8WUB8 498 aaKnown RBP7.07□□□□□ -1.28
SMG6-211ENST00000572369 RND1Q92730 232 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 HOXB13Q92826 284 aaPredicted RBP7.07□□□□□ -1.28
SMG6-211ENST00000572369 RAB8BQ92930 207 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 VPS33AQ96AX1 596 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 SDCCAG3Q96C92 435 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 NEURL3Q96EH8 262 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 SH3YL1Q96HL8 342 aaPredicted RBP7.07□□□□□ -1.28
SMG6-211ENST00000572369 UGT2B28Q9BY64 529 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 UBQLN3Q9H347 655 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 GSX1Q9H4S2 264 aaPredicted RBP7.07□□□□□ -1.28
SMG6-211ENST00000572369 FGFR1OP2Q9NVK5 253 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 FBXL2Q9UKC9 423 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 MYO7BQ6PIF6 2116 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 DNAJC13O75165 2243 aa7.07□□□□□ -1.28
SMG6-211ENST00000572369 PHF3Q92576 2039 aaKnown RBP7.06□□□□□ -1.28
SMG6-211ENST00000572369 MAP1AP78559 2803 aaPredicted RBP7.06□□□□□ -1.28
SMG6-211ENST00000572369 CUBNO60494 3623 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 ACANP16112 2415 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 C17orf51A8MQB3 221 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 AHRRA9YTQ3 701 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 ALG1L2C9J202 215 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 PRSS44E7EML9 344 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 H0Y3Z8 333 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 HCRTR2O43614 444 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 STX11O75558 287 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 CYP7B1O75881 506 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 NGFRP08138 427 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 HOXD4P09016 255 aaPredicted RBP7.06□□□□□ -1.28
SMG6-211ENST00000572369 ENDOUP21128 410 aaKnown RBP7.06□□□□□ -1.28
SMG6-211ENST00000572369 MSX1P28360 303 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 CCR4P51679 360 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 ATP12AP54707 1039 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 GAS1P54826 345 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 CRYZQ08257 329 aaKnown RBP7.06□□□□□ -1.28
SMG6-211ENST00000572369 GANABQ14697 944 aaKnown RBP7.06□□□□□ -1.28
SMG6-211ENST00000572369 ZNF630Q2M218 657 aaPredicted RBP7.06□□□□□ -1.28
SMG6-211ENST00000572369 ARHGAP11BQ3KRB8 267 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 EMC4Q5J8M3 183 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 EXOSC6Q5RKV6 272 aaKnown RBP7.06□□□□□ -1.28
SMG6-211ENST00000572369 C1orf185Q5T7R7 199 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 VASNQ6EMK4 673 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 SLC2A7Q6PXP3 512 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 MTERF4Q7Z6M4 381 aaKnown RBP7.06□□□□□ -1.28
SMG6-211ENST00000572369 MISPQ8IVT2 679 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 OR2M3Q8NG83 312 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 B4GALNT2Q8NHY0 566 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 ASB5Q8WWX0 329 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 SMPDL3BQ92485 455 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 SPDL1Q96EA4 605 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 TRIB1Q96RU8 372 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 SDF2Q99470 211 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 TIMP4Q99727 224 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 PIGQQ9BRB3 760 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 TMEM120AQ9BXJ8 343 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 OR2B2Q9GZK3 357 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 RAD21L1Q9H4I0 556 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 CACYBPQ9HB71 228 aaKnown RBP7.06□□□□□ -1.28
SMG6-211ENST00000572369 STOML1Q9UBI4 398 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 MKLN1Q9UL63 735 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 VDAC3Q9Y277 283 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 MRPS18CQ9Y3D5 142 aaKnown RBP7.06□□□□□ -1.28
SMG6-211ENST00000572369 WDR45Q9Y484 360 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 DTNAQ9Y4J8 743 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 HRH3Q9Y5N1 445 aa7.06□□□□□ -1.28
SMG6-211ENST00000572369 PCNX3Q9H6A9 2034 aa7.05□□□□□ -1.28
SMG6-211ENST00000572369 A0A1W2PQD3 144 aa7.05□□□□□ -1.28
SMG6-211ENST00000572369 H3BML4 177 aa7.05□□□□□ -1.28
SMG6-211ENST00000572369 HMGN4O00479 90 aa7.05□□□□□ -1.28
SMG6-211ENST00000572369 ANGPT2O15123 496 aa7.05□□□□□ -1.28
SMG6-211ENST00000572369 SEC14L5O43304 696 aa7.05□□□□□ -1.28
SMG6-211ENST00000572369 CLDN14O95500 239 aa7.05□□□□□ -1.28
SMG6-211ENST00000572369 NR2F1P10589 423 aa7.05□□□□□ -1.28
SMG6-211ENST00000572369 UBL4AP11441 157 aa7.05□□□□□ -1.28
SMG6-211ENST00000572369 CHMP24386 653 aa7.05□□□□□ -1.28
SMG6-211ENST00000572369 MDH1P40925 334 aaKnown RBP7.05□□□□□ -1.28
SMG6-211ENST00000572369 STARP49675 285 aa7.05□□□□□ -1.28
SMG6-211ENST00000572369 ATP4BP51164 291 aa7.05□□□□□ -1.28
SMG6-211ENST00000572369 P2RX1P51575 399 aa7.05□□□□□ -1.28
SMG6-211ENST00000572369 ARFIP2P53365 341 aa7.05□□□□□ -1.28
SMG6-211ENST00000572369 NUP107P57740 925 aa7.05□□□□□ -1.28
SMG6-211ENST00000572369 TXNL4AP83876 142 aaKnown RBP7.05□□□□□ -1.28
SMG6-211ENST00000572369 ADORA2A-AS1P86434 159 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms