RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 OR6C70A6NIJ9 312 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 CDK2AP1O14519 115 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 NDUFAB1O14561 156 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 GNB5O14775 395 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 AIM2O14862 343 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 GMFGO60234 142 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 COX4I1P13073 169 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 ETFAP13804 333 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 CASP3P42574 277 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 ANXA11P50995 505 aaKnown RBP12.13□□□□□ -0.47
CCDC40-205ENST00000571028 STX5Q13190 355 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 FBXW10Q5XX13 1052 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 ARHGAP11AQ6P4F7 1023 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 HMGN2P46Q86SG4 172 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 MARCH3Q86UD3 253 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 TREML1Q86YW5 311 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 FBXW8Q8N3Y1 598 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 ZNF614Q8N883 585 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 GATSQ8NAP1 163 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 CCDC197Q8NCU1 140 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 BCAS4Q8TDM0 211 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 TSPEARQ8WU66 669 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 HOXB13Q92826 284 aaPredicted RBP12.13□□□□□ -0.47
CCDC40-205ENST00000571028 RCN3Q96D15 328 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 C18orf12Q96KH6 178 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 SMR3AQ99954 134 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 FAM173AQ9BQD7 235 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 OSBPL11Q9BXB4 747 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 MYLK2Q9H1R3 596 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 TUBA8Q9NY65 449 aaPredicted RBP12.13□□□□□ -0.47
CCDC40-205ENST00000571028 CNIH4Q9P003 139 aa12.13□□□□□ -0.47
CCDC40-205ENST00000571028 NUP214P35658 2090 aaPredicted RBP12.13□□□□□ -0.47
CCDC40-205ENST00000571028 ACANP16112 2415 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 C17orf51A8MQB3 221 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 FAM171A2A8MVW0 826 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 HMGN4O00479 90 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 ABCB7O75027 752 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 DCTN3O75935 186 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 INHBBP09529 407 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 NR2F1P10589 423 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 HPGDP15428 266 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 PTPN6P29350 595 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 CPA2P48052 419 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 NUP107P57740 925 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 DSTNP60981 165 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 PSPHP78330 225 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 TOMM20Q15388 145 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 GPR68Q15743 365 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 GRAMD1BQ3KR37 738 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 FLYWCH1Q4VC44 716 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 EXOSC6Q5RKV6 272 aaKnown RBP12.12□□□□□ -0.47
CCDC40-205ENST00000571028 LRIF1Q5T3J3 769 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 OR5M10Q6IEU7 315 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 DLEU7Q6UYE1 221 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 ANKFN1Q8N957 763 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 OR52N2Q8NGI0 321 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 OR4C3Q8NH37 302 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 RP9Q8TA86 221 aaKnown RBP12.12□□□□□ -0.47
CCDC40-205ENST00000571028 MIPOL1Q8TD10 442 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 LRRC37BQ96QE4 947 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 SDF2Q99470 211 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 CGREF1Q99674 301 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 MDFIQ99750 246 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 SLC39A3Q9BRY0 314 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 G6PC3Q9BUM1 346 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 THUMPD3Q9BV44 507 aaKnown RBP12.12□□□□□ -0.47
CCDC40-205ENST00000571028 TBL1XR1Q9BZK7 514 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 SH2D2AQ9NP31 389 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 MKLN1Q9UL63 735 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 L3MBTL1Q9Y468 752 aa12.12□□□□□ -0.47
CCDC40-205ENST00000571028 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.12□□□□□ -0.47
CCDC40-205ENST00000571028 ZNF469Q96JG9 3925 aaPredicted RBP12.12□□□□□ -0.47
CCDC40-205ENST00000571028 ABCA4P78363 2273 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 BBIP1A8MTZ0 92 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 EVPLLA8MZ36 301 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 SLC22A2O15244 555 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 FCMRO60667 390 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 PDE9AO76083 593 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 AGR2O95994 175 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 NUDT7P0C024 238 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 KIR2DL3P43628 341 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 CLK3P49761 638 aaKnown RBP12.11□□□□□ -0.47
CCDC40-205ENST00000571028 MTPNP58546 118 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 PPIAP62937 165 aaKnown RBP12.11□□□□□ -0.47
CCDC40-205ENST00000571028 HPCAP84074 193 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 SELPLGQ14242 412 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 RGNQ15493 299 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 SYPL1Q16563 259 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 RUNDC3AQ59EK9 446 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 ARSKQ6UWY0 536 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 PACS2Q86VP3 889 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 RPRMLQ8N4K4 120 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 FAM110BQ8TC76 370 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 ROPN1LQ96C74 230 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 CPPED1Q9BRF8 314 aaPredicted RBP12.11□□□□□ -0.47
CCDC40-205ENST00000571028 ANGPTL4Q9BY76 406 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 DEFB127Q9H1M4 99 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 IKZF5Q9H5V7 419 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 PIF1Q9H611 641 aa12.11□□□□□ -0.47
CCDC40-205ENST00000571028 PROK2Q9HC23 129 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms