RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 ZNF717Q9BY31 904 aaPredicted RBP9.83□□□□□ -0.84
VPS53-207ENST00000570510 ANKZF1Q9H8Y5 726 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 TIGARQ9NQ88 270 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 SENP1Q9P0U3 644 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 TMEFF2Q9UIK5 374 aaPredicted RBP9.83□□□□□ -0.84
VPS53-207ENST00000570510 MID2Q9UJV3 735 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 MGAT4BQ9UQ53 548 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 VDAC3Q9Y277 283 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 TGP01266 2768 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 EXPH5Q8NEV8 1989 aa9.83□□□□□ -0.84
VPS53-207ENST00000570510 A0A0A6YYJ9 748 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 CCDC151A5D8V7 595 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 C17orf51A8MQB3 221 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 SHISA8B8ZZ34 492 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 SLCO1B7G3V0H7 640 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 H7C417 338 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 NDUFS8O00217 210 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 TNFSF11O14788 317 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 GLRA3O75311 464 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 CLDN9O95484 217 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 NTN1O95631 604 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 IL33O95760 270 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 CBX7O95931 251 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 OTCP00480 354 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 FAM153BP0C7A2 387 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 NR4A2P43354 598 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 RFX3P48380 749 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 GAS1P54826 345 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 CARD18P57730 90 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 CORO7P57737 925 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 MGAT2Q10469 447 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 GTF2H2Q13888 395 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 RNPS1Q15287 305 aaKnown RBP9.82□□□□□ -0.84
VPS53-207ENST00000570510 FAM153CQ494X1 144 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 TCHHL1Q5QJ38 904 aaPredicted RBP9.82□□□□□ -0.84
VPS53-207ENST00000570510 TTC19Q6DKK2 380 aaPredicted RBP9.82□□□□□ -0.84
VPS53-207ENST00000570510 SLC48A1Q6P1K1 146 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 GTF2H2CQ6P1K8 395 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 KLHL17Q6TDP4 642 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 GALNT10Q86SR1 603 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 GGNQ86UU5 652 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 TMEM151AQ8N4L1 468 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 ZNF540Q8NDQ6 660 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 OR2V1Q8NHB1 315 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 KAT2AQ92830 837 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 BTBD9Q96Q07 612 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 TRMOQ9BU70 441 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 PRR14Q9BWN1 585 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 TBL1XR1Q9BZK7 514 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 IPPKQ9H8X2 491 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 NMRK1Q9NWW6 199 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 MKS1Q9NXB0 559 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 ZNF639Q9UID6 485 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 GRID1Q9ULK0 1009 aa9.82□□□□□ -0.84
VPS53-207ENST00000570510 E7EQL1 145 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 LYZL6O75951 148 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 LY6HO94772 140 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 ESRRBO95718 433 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 RPS17P08708 135 aaKnown RBP9.81□□□□□ -0.84
VPS53-207ENST00000570510 DHRS4L1P0CG22 281 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 CT45A8P0DMV1 189 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 CT45A9P0DMV2 189 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 HSD3B1P14060 373 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 PCMT1P22061 227 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 ATP5F1P24539 256 aaPredicted RBP9.81□□□□□ -0.84
VPS53-207ENST00000570510 HSD3B2P26439 372 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 CRHR1P34998 444 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 C17orf67Q0P5P2 114 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 LTB4RQ15722 352 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 DECR1Q16698 335 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 CT45A2Q5DJT8 189 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 C11orf71Q6IPW1 123 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 TFAP2EQ6VUC0 442 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 Q6ZSR9 355 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 ESPNLQ6ZVH7 1005 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 PLD6Q8N2A8 252 aaKnown RBP9.81□□□□□ -0.84
VPS53-207ENST00000570510 CDYL2Q8N8U2 506 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 ZNF418Q8TF45 676 aaPredicted RBP9.81□□□□□ -0.84
VPS53-207ENST00000570510 MZB1Q8WU39 189 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 OSTF1Q92882 214 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 ATP6V1E2Q96A05 226 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 MRRFQ96E11 262 aaKnown RBP9.81□□□□□ -0.84
VPS53-207ENST00000570510 L3HYPDHQ96EM0 354 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 FAIM2Q9BWQ8 316 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 SHCBP1LQ9BZQ2 653 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 TMEM185BQ9H7F4 350 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 BRF2Q9HAW0 419 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 TAS2R9Q9NYW1 312 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 MRTO4Q9UKD2 239 aaKnown RBP9.81□□□□□ -0.84
VPS53-207ENST00000570510 ADAM29Q9UKF5 820 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 RAB21Q9UL25 225 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 ABCG2Q9UNQ0 655 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 PCDHA9Q9Y5H5 950 aa9.81□□□□□ -0.84
VPS53-207ENST00000570510 PRR14LQ5THK1 2151 aa9.8□□□□□ -0.84
VPS53-207ENST00000570510 MALRD1Q5VYJ5 2156 aa9.8□□□□□ -0.84
VPS53-207ENST00000570510 SERTM1A2A2V5 107 aa9.8□□□□□ -0.84
VPS53-207ENST00000570510 SERINC4A6NH21 518 aa9.8□□□□□ -0.84
VPS53-207ENST00000570510 B4DXG7 233 aa9.8□□□□□ -0.84
VPS53-207ENST00000570510 VENTXO95231 258 aa9.8□□□□□ -0.84
VPS53-207ENST00000570510 GGT1P19440 569 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms