RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, human

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKD1-240	ENST00000570253	CD3E	P07766	207 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	AGTR1	P30556	359 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	SERPINB4	P48594	390 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	MANF	P55145	182 aa	Known RBP	18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	CARD18	P57730	90 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	SLC18A2	Q05940	514 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	PRSS53	Q2L4Q9	553 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	PLPPR5	Q32ZL2	321 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	APOOL	Q6UXV4	268 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	ZNF551	Q7Z340	670 aa	Predicted RBP	18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	TRABD2A	Q86V40	505 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	OSTF1	Q92882	214 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	CPNE4	Q96A23	557 aa	Predicted RBP	18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	SH3YL1	Q96HL8	342 aa	Predicted RBP	18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	MS4A4E	Q96PG1	132 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	TMEM185B	Q9H7F4	350 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	UBQLN4	Q9NRR5	601 aa		18.82	■□□□□ 0.6
PKD1-240	ENST00000570253	GOLGA8R	I6L899	631 aa		18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	RGS14	O43566	566 aa		18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	IFNA2	P01563	188 aa		18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	IGKV1D-16	P01601	117 aa		18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	OPN1LW	P04000	364 aa		18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	ALOX5	P09917	674 aa		18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	FOXA1	P55317	472 aa		18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	CAPRIN1	Q14444	709 aa	Known RBP	18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	ADAM5	Q6NVV9	412 aa		18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	LILRA2	Q8N149	483 aa		18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	C17orf53	Q8N3J3	647 aa	Predicted RBP	18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	COX18	Q8N8Q8	333 aa		18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	B4GALNT2	Q8NHY0	566 aa		18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	S100PBP	Q96BU1	408 aa		18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	PPCDC	Q96CD2	204 aa		18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	CHMP6	Q96FZ7	201 aa		18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	CHD3	Q12873	2000 aa	Known RBP	18.81	■□□□□ 0.6
PKD1-240	ENST00000570253	RTTN	Q86VV8	2226 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253		A0A1W2PP18	115 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	SLC28A1	O00337	649 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	GLRA3	O75311	464 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	NUDT14	O95848	222 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	UROS	P10746	265 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	PYGB	P11216	843 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	ELK4	P28324	431 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	PRIM2	P49643	509 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	HEPHL1	Q6MZM0	1159 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	ZCCHC12	Q6PEW1	402 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	FIGNL1	Q6PIW4	674 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	TRMT10C	Q7L0Y3	403 aa	Known RBP	18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	HOMEZ	Q8IX15	550 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	OR4C3	Q8NH37	302 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	FBXO30	Q8TB52	745 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	HSD17B8	Q92506	261 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	JADE3	Q92613	823 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	ZNF764	Q96H86	408 aa	Predicted RBP	18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	ALG2	Q9H553	416 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	FBXO34	Q9NWN3	711 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	SH3BP4	Q9P0V3	963 aa		18.8	■□□□□ 0.6
PKD1-240	ENST00000570253	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	18.8	■□□□□ 0.6
PKD1-240	ENST00000570253		A0A0J9YW62	118 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253		A0A1W2PQD3	144 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	RNF223	E7ERA6	249 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253		H3BNH8	94 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	KCNK2	O95069	426 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	NID1	P14543	1247 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	ATP6V1C1	P21283	382 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	SFTPD	P35247	375 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	ZNF239	Q16600	458 aa	Known RBP	18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	ZYG11A	Q6WRX3	759 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	FRMD7	Q6ZUT3	714 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	CCDC63	Q8NA47	563 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	ZNF527	Q8NB42	609 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	KISS1R	Q969F8	398 aa	Predicted RBP	18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	REEP4	Q9H6H4	257 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	L2HGDH	Q9H9P8	463 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	LRTM1	Q9HBL6	345 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	GP6	Q9HCN6	339 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	C1orf109	Q9NX04	203 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	ADAM21	Q9UKJ8	722 aa		18.79	■□□□□ 0.6
PKD1-240	ENST00000570253	UBFD1	O14562	309 aa	Known RBP	18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	CHEK2	O96017	543 aa		18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	NEFH	P12036	1026 aa		18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	POU6F2	P78424	691 aa	Predicted RBP	18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	CCDC153	Q494R4	210 aa		18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	NCMAP	Q5T1S8	102 aa		18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	MFSD12	Q6NUT3	480 aa		18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	PODNL1	Q6PEZ8	512 aa		18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	MTERF4	Q7Z6M4	381 aa	Known RBP	18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	BANP	Q8N9N5	519 aa		18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	RAB3IL1	Q8TBN0	382 aa		18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	RNF128	Q8TEB7	428 aa		18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	SMAP2	Q8WU79	429 aa	Predicted RBP	18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	ROBO4	Q8WZ75	1007 aa		18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	HOXB13	Q92826	284 aa	Predicted RBP	18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	CIDEC	Q96AQ7	238 aa	Predicted RBP	18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	ARL8A	Q96BM9	186 aa		18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	EGLN2	Q96KS0	407 aa		18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	HS6ST2	Q96MM7	605 aa		18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	CCT7	Q99832	543 aa		18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	REG4	Q9BYZ8	158 aa		18.78	■□□□□ 0.6
PKD1-240	ENST00000570253	BARX1	Q9HBU1	254 aa	Predicted RBP	18.78	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms