RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 PRAMEF17Q5VTA0 474 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 FRG2Q64ET8 278 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 MED27Q6P2C8 311 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 PAPD4Q6PIY7 484 aaKnown RBP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 RPS27LQ71UM5 84 aaKnown RBP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 PATL1Q86TB9 770 aaKnown RBP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 SLC9B2Q86UD5 537 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 SLC22A18ASQ8N1D0 253 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 ARL6IP6Q8N6S5 226 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 CEP76Q8TAP6 659 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 SELENOMQ8WWX9 145 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 STARD8Q92502 1023 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 SPSB1Q96BD6 273 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 MOCOSQ96EN8 888 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 OR52B2Q96RD2 323 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 SCNM1Q9BWG6 230 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 SLC5A7Q9GZV3 580 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 WDR55Q9H6Y2 383 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 PPP1R3EQ9H7J1 279 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 NT5DC2Q9H857 520 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 UCK1Q9HA47 277 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 EBF2Q9HAK2 575 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 MRPL40Q9NQ50 206 aaKnown RBP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 ANKMY1Q9P2S6 941 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 SPASTQ9UBP0 616 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 APOBEC3BQ9UH17 382 aaKnown RBP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 ZNF225Q9UK10 706 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 ZNF490Q9ULM2 529 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 PSMD13Q9UNM6 376 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 EIF3LQ9Y262 564 aaKnown RBP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 TDRKHQ9Y2W6 561 aaKnown RBP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 FIS1Q9Y3D6 152 aa6.57□□□□□ -1.36
CNOT1-222ENST00000570139 PCYT1BQ9Y5K3 369 aaPredicted RBP6.57□□□□□ -1.36
CNOT1-222ENST00000570139 CEP192Q8TEP8 1941 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 KCNE1BA0A087WTH5 132 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 E7EQ34 232 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 TLR4O00206 839 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 PSMD12O00232 456 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-222ENST00000570139 FOXE1O00358 373 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-222ENST00000570139 PPP6CO00743 305 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 LSM1O15116 133 aaKnown RBP6.56□□□□□ -1.36
CNOT1-222ENST00000570139 YKT6O15498 198 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 DFNA5O60443 496 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 CREG1O75629 220 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 MYO1DO94832 1006 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 LINC00032P0C843 101 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 MAKP20794 623 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 PTPN4P29074 926 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 PRDX3P30048 256 aaKnown RBP6.56□□□□□ -1.36
CNOT1-222ENST00000570139 CCR8P51685 355 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 ARFIP1P53367 373 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 CDH12P55289 794 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 FOXA1P55317 472 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 C21orf59P57076 290 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 TMPRSS3P57727 454 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 NCALDP61601 193 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 PPP2R2BQ00005 443 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 PLP2Q04941 152 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 CYLC2Q14093 348 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-222ENST00000570139 DOC2AQ14183 400 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 ABRAXAS2Q15018 415 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 PPA1Q15181 289 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 KIF19Q2TAC6 998 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 C18orf21Q32NC0 220 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-222ENST00000570139 ZNF528Q3MIS6 628 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 CCSMST1Q4G0I0 132 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 SPIN4Q56A73 249 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 FBXO48Q5FWF7 155 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 TMEM31Q5JXX7 168 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 ZBTB49Q6ZSB9 765 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 ASRGL1Q7L266 308 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 TMPRSS11BQ86T26 416 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 AMIGO1Q86WK6 493 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 ZFAND4Q86XD8 727 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 FNDC5Q8NAU1 212 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 OR52E1Q8NGJ3 308 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 WDR20Q8TBZ3 569 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 RLN3Q8WXF3 142 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 NEIL2Q969S2 332 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 ERGIC1Q969X5 290 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 TSACCQ96A04 125 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-222ENST00000570139 ESAMQ96AP7 390 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 SARAFQ96BY9 339 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 PYCR2Q96C36 320 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 CMTM7Q96FZ5 175 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 KCNA7Q96RP8 456 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 SERPINI1Q99574 410 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 ZBTB18Q99592 522 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 SEPHS2Q99611 448 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 AIF1LQ9BQI0 150 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 CENPKQ9BS16 269 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 BTBD10Q9BSF8 475 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 SPXQ9BT56 116 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 TUBB1Q9H4B7 451 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 ESRP2Q9H6T0 727 aaKnown RBP6.56□□□□□ -1.36
CNOT1-222ENST00000570139 TM9SF3Q9HD45 589 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 SDR39U1Q9NRG7 319 aaPredicted RBP6.56□□□□□ -1.36
CNOT1-222ENST00000570139 AIG1Q9NVV5 245 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 C2orf42Q9NWW7 574 aa6.56□□□□□ -1.36
CNOT1-222ENST00000570139 HPF1Q9NWY4 346 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms