RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 PEPDP12955 493 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 IDO1P14902 403 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 HPGDP15428 266 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 POU3F2P20265 443 aaPredicted RBP11.77□□□□□ -0.53
CNOT1-220ENST00000569916 BMP5P22003 454 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 CLDN15P56746 228 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 FLYWCH1Q4VC44 716 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 PDCD4Q53EL6 469 aaKnown RBP11.77□□□□□ -0.53
CNOT1-220ENST00000569916 SAXO2Q658L1 398 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 MISPQ8IVT2 679 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 DMRTC2Q8IXT2 367 aaPredicted RBP11.77□□□□□ -0.53
CNOT1-220ENST00000569916 CHDHQ8NE62 594 aaPredicted RBP11.77□□□□□ -0.53
CNOT1-220ENST00000569916 NEURL3Q96EH8 262 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 SH3YL1Q96HL8 342 aaPredicted RBP11.77□□□□□ -0.53
CNOT1-220ENST00000569916 SDF2Q99470 211 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 NPAS1Q99742 590 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 OR51I1Q9H343 314 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 SLCO1B3Q9NPD5 702 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 ZNF629Q9UEG4 869 aaPredicted RBP11.77□□□□□ -0.53
CNOT1-220ENST00000569916 VDAC3Q9Y277 283 aa11.77□□□□□ -0.53
CNOT1-220ENST00000569916 DCHS2Q6V1P9 2916 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 A0A087WZY1 265 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 DUXAA6NLW8 204 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 HMGB1P1B2RPK0 211 aaPredicted RBP11.76□□□□□ -0.53
CNOT1-220ENST00000569916 H0YC42 278 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 H3BML4 177 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 SASH3O75995 380 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 AK1P00568 194 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 C1QCP02747 245 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 ZNF17P17021 662 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 CTSSP25774 331 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 CDKN2CP42773 168 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 RNF144AP50876 292 aaPredicted RBP11.76□□□□□ -0.53
CNOT1-220ENST00000569916 SUCLG1P53597 346 aaKnown RBP11.76□□□□□ -0.53
CNOT1-220ENST00000569916 ATP12AP54707 1039 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 CASP9P55211 416 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 TPD52P55327 224 aaPredicted RBP11.76□□□□□ -0.53
CNOT1-220ENST00000569916 DLX5P56178 289 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 ZNF117Q03924 483 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 FUT5Q11128 374 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 PLPPR5Q32ZL2 321 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 ARHGAP11BQ3KRB8 267 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 KLHL26Q53HC5 615 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 HEPHL1Q6MZM0 1159 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 OLIG3Q7RTU3 272 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 MTERF4Q7Z6M4 381 aaKnown RBP11.76□□□□□ -0.53
CNOT1-220ENST00000569916 UBQLNLQ8IYU4 475 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 GOLGA6L1Q8N7Z2 621 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 ZNF527Q8NB42 609 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 GLB1L3Q8NCI6 653 aaPredicted RBP11.76□□□□□ -0.53
CNOT1-220ENST00000569916 B4GALNT2Q8NHY0 566 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 PHOSPHO1Q8TCT1 267 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 LRRC8CQ8TDW0 803 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 WNT2BQ93097 391 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 C14orf79Q96F83 325 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 ZFP3Q96NJ6 502 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 OR52E6Q96RD3 313 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 TM9SF2Q99805 663 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 SLC35A5Q9BS91 424 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 INPP5KQ9BT40 448 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 ZNF350Q9GZX5 532 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 HOXD1Q9GZZ0 328 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 SDR39U1Q9NRG7 319 aaPredicted RBP11.76□□□□□ -0.53
CNOT1-220ENST00000569916 MED17Q9NVC6 651 aa11.76□□□□□ -0.53
CNOT1-220ENST00000569916 C7orf72A4D263 438 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 SEC14L5O43304 696 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 OIP5O43482 229 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 DIAPH2O60879 1101 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 TNFRSF21O75509 655 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 SLC22A3O75751 556 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 RCBTB2O95199 551 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 TGM6O95932 706 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 TMIGD3P0DMS9 266 aaPredicted RBP11.75□□□□□ -0.53
CNOT1-220ENST00000569916 OR12D1P0DN82 309 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 PSMA4P25789 261 aaKnown RBP11.75□□□□□ -0.53
CNOT1-220ENST00000569916 KHKP50053 298 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 ASCL1P50553 236 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 AGFG1P52594 562 aaKnown RBP11.75□□□□□ -0.53
CNOT1-220ENST00000569916 CLDN20P56880 219 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 PPP2R2AP63151 447 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 FOXF2Q12947 444 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 GSTA3Q16772 222 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 FBXL19-AS1Q494R0 122 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 TNFAIP8L2Q6P589 184 aaPredicted RBP11.75□□□□□ -0.53
CNOT1-220ENST00000569916 CBLN3Q6UW01 205 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 EPGNQ6UW88 154 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 GGNQ86UU5 652 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 GRAMD2AQ8IUY3 354 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 GTPBP8Q8N3Z3 284 aaPredicted RBP11.75□□□□□ -0.53
CNOT1-220ENST00000569916 MEIOBQ8N635 442 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 RAB8BQ92930 207 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 ZBTB8AQ96BR9 441 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 PANX1Q96RD7 426 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 ZBTB18Q99592 522 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 NMUR2Q9GZQ4 415 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 EXD2Q9NVH0 621 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 ZIM2Q9NZV7 527 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 KCNE5Q9UJ90 142 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 ICAM5Q9UMF0 924 aa11.75□□□□□ -0.53
CNOT1-220ENST00000569916 DTNAQ9Y4J8 743 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms