RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 ASB5Q8WWX0 329 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 LIN37Q96GY3 246 aaPredicted RBP6.22□□□□□ -1.41
SMG1-217ENST00000569764 HARBI1Q96MB7 349 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 CPPED1Q9BRF8 314 aaPredicted RBP6.22□□□□□ -1.41
SMG1-217ENST00000569764 VN1R3Q9BXE9 311 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 ULBP3Q9BZM4 244 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 DDX31Q9H8H2 851 aaKnown RBP6.22□□□□□ -1.41
SMG1-217ENST00000569764 GSTK1Q9Y2Q3 226 aa6.22□□□□□ -1.41
SMG1-217ENST00000569764 TEX13DA0A0J9YY54 714 aaPredicted RBP6.21□□□□□ -1.41
SMG1-217ENST00000569764 KCNK1O00180 336 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 SIVA1O15304 175 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 NME2P1O60361 137 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 SRP72O76094 671 aaKnown RBP6.21□□□□□ -1.41
SMG1-217ENST00000569764 FAM107AO95990 144 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 GSTA1P08263 222 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 NCK1P16333 377 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 NDUFB7P17568 137 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 CRABP1P29762 137 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 CTSOP43234 321 aaPredicted RBP6.21□□□□□ -1.41
SMG1-217ENST00000569764 HERV-K104P63124 156 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 NFATC2Q13469 925 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 GAMTQ14353 236 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 SLC1A5Q15758 541 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 PNLIPRP3Q17RR3 467 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 OR52E8Q6IFG1 317 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 PRMT9Q6P2P2 845 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 PPIL6Q8IXY8 311 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 ULK2Q8IYT8 1036 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 PNPLA1Q8N8W4 532 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 OR5L2Q8NGL0 311 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 OR13C3Q8NGS6 347 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 DCAKDQ8WVC6 231 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 MRGPRFQ96AM1 343 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 NPAS2Q99743 824 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 ZNF223Q9UK11 482 aaPredicted RBP6.21□□□□□ -1.41
SMG1-217ENST00000569764 PPP1R3CQ9UQK1 317 aa6.21□□□□□ -1.41
SMG1-217ENST00000569764 A8MU76 341 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 RAB27BO00194 218 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 ADRA2CP18825 462 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 BCKDHBP21953 392 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 ELK4P28324 431 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 SOX8P57073 446 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 STXBP1P61764 594 aaKnown RBP6.21□□□□□ -1.42
SMG1-217ENST00000569764 ABHD18Q0P651 414 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 TUBB3Q13509 450 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 HEPACAMQ14CZ8 416 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 HIF1AQ16665 826 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 RNF151Q2KHN1 245 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 LBHQ53QV2 105 aaPredicted RBP6.21□□□□□ -1.42
SMG1-217ENST00000569764 MBNL2Q5VZF2 373 aaKnown RBP6.21□□□□□ -1.42
SMG1-217ENST00000569764 PAQR3Q6TCH7 311 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 CDHR3Q6ZTQ4 885 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 CTAGE3PQ8IX95 158 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 OR51L1Q8NGJ5 315 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 CCDC120Q96HB5 630 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 MAPKAP1Q9BPZ7 522 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 C1QTNF2Q9BXJ5 285 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 KLHL31Q9H511 634 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 TMEM185BQ9H7F4 350 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 PARPBPQ9NWS1 579 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 IMPAD1Q9NX62 359 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 TMEM184BQ9Y519 407 aaPredicted RBP6.21□□□□□ -1.42
SMG1-217ENST00000569764 TCRBV9S1A1TA0A576 114 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 MGAT4DA6NG13 374 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 DRGXA6NNA5 263 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 F8WDY8 70 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 K7ESM1 405 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 ARPC5O15511 151 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 OR2B3O76000 313 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 CBSLP0DN79 551 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 HLA-DMAP28067 261 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 CD68P34810 354 aaPredicted RBP6.21□□□□□ -1.42
SMG1-217ENST00000569764 CBSP35520 551 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 SOAT1P35610 550 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 MAGEA3P43357 314 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 RAB11AP62491 216 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 SLC13A2Q13183 592 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 ZNF273Q14593 569 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 RAB11BQ15907 218 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 NKAIN1Q4KMZ8 207 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 FAM91A1Q658Y4 838 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 ACAD11Q709F0 780 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 TRABD2AQ86V40 505 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 ADGRG5Q8IZF4 528 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 OR9A2Q8NGT5 310 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 PROKR1Q8TCW9 393 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 SIGLEC10Q96LC7 697 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 AIF1LQ9BQI0 150 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 NARFLQ9H6Q4 476 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 CHST11Q9NPF2 352 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 C14orf105Q9NVL8 296 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 SDHAF2Q9NX18 166 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 LGALS13Q9UHV8 139 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 NAGKQ9UJ70 344 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 TCFL5Q9UL49 500 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 FLVCR2Q9UPI3 526 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 URB1O60287 2271 aaKnown RBP6.21□□□□□ -1.42
SMG1-217ENST00000569764 ANAPC1Q9H1A4 1944 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 TRAV17A0A0B4J275 112 aa6.21□□□□□ -1.42
SMG1-217ENST00000569764 FABP12A6NFH5 140 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms