RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 ZNF721Q8TF20 911 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 APH1BQ8WW43 257 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 NR4A3Q92570 626 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 LCORQ96JN0 433 aaPredicted RBP6.52□□□□□ -1.37
SMG1-215ENST00000568239 SLC46A1Q96NT5 459 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 PSD2Q9BQI7 771 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 AKIRIN1Q9H9L7 192 aaPredicted RBP6.52□□□□□ -1.37
SMG1-215ENST00000568239 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.52□□□□□ -1.37
SMG1-215ENST00000568239 PAK1IP1Q9NWT1 392 aaPredicted RBP6.52□□□□□ -1.37
SMG1-215ENST00000568239 TVP23BQ9NYZ1 205 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 NDUFA13Q9P0J0 144 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 REV1Q9UBZ9 1251 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 CNTRLQ7Z7A1 2325 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 TRAPPC13A5PLN9 417 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 ZAR1LA6NP61 321 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 MEN1O00255 615 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 PIP5K1CO60331 668 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 OR5F1O95221 314 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 PPICP45877 212 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 EMP2P54851 167 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 ILKQ13418 452 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 CNPY1Q3B7I2 92 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 DESI1Q6ICB0 168 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 LCN10Q6JVE6 187 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 C1orf94Q6P1W5 598 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 CLVS1Q8IUQ0 354 aaPredicted RBP6.52□□□□□ -1.37
SMG1-215ENST00000568239 SPARTQ8N0X7 666 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 LINC00471Q8N535 108 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 TMCO5AQ8N6Q1 288 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 OR14A16Q8NHC5 309 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 PHOSPHO1Q8TCT1 267 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 ACOT11Q8WXI4 607 aaPredicted RBP6.52□□□□□ -1.37
SMG1-215ENST00000568239 HOXB13Q92826 284 aaPredicted RBP6.52□□□□□ -1.37
SMG1-215ENST00000568239 DGCR14Q96DF8 476 aaKnown RBP6.52□□□□□ -1.37
SMG1-215ENST00000568239 ART5Q96L15 291 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 FUZQ9BT04 418 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 DSN1Q9H410 356 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 EGLN3Q9H6Z9 239 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 FLRT3Q9NZU0 649 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 ERVK-18Q9QC07 812 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 IL20RAQ9UHF4 553 aa6.52□□□□□ -1.37
SMG1-215ENST00000568239 TRIM64A6NGJ6 449 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 SCDO00767 359 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 IGKV3-11P04433 115 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 HBQ1P09105 142 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 ZNF28P17035 718 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 DRD5P21918 477 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 IL12BP29460 328 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 ALDH3B2P48448 385 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 COX10Q12887 443 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 RAB39AQ14964 217 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 C9orf40Q8IXQ3 194 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 TEX47Q8TBZ9 253 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 GNPDA2Q8TDQ7 276 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 FBLIM1Q8WUP2 373 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 PMEPA1Q969W9 287 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 C8orf44Q96CB5 159 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 CRB3Q9BUF7 120 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 ULBP3Q9BZM4 244 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 ENAMQ9NRM1 1142 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 SIDT1Q9NXL6 827 aaKnown RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 ZNF226Q9NYT6 803 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 RPS6KB2Q9UBS0 482 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 TESQ9UGI8 421 aaKnown RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 WARS2Q9UGM6 360 aaKnown RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 CELSR3Q9NYQ7 3312 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 TEX51A0A1B0GUA7 166 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 GTPBP1O00178 669 aaKnown RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 NTN3O00634 580 aaPredicted RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 FLRT2O43155 660 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 RGS10O43665 173 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 ADAM11O75078 769 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 CPNE3O75131 537 aaKnown RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 ALOX12BO75342 701 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 FADS2O95864 444 aaKnown RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 KLK3P07288 261 aaPredicted RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 HTR1AP08908 422 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 IFI30P13284 250 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 ITIH1P19827 911 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 GSTM3P21266 225 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 PEX19P40855 299 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 PSMD4P55036 377 aaKnown RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 CLDN6P56747 220 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 GABARAPL2P60520 117 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 COPZ1P61923 177 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 PLCXD2Q0VAA5 305 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 IL11RAQ14626 422 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 GINS1Q14691 196 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 EBPQ15125 230 aaKnown RBP6.51□□□□□ -1.37
SMG1-215ENST00000568239 ALG10BQ5I7T1 473 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 GPR107Q5VW38 600 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 OVCH1Q7RTY7 1134 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 TCEANCQ8N8B7 351 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 ZNF527Q8NB42 609 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 PLPP5Q8NEB5 264 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 OR5M3Q8NGP4 307 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 OR1N1Q8NGS0 311 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 PFN4Q8NHR9 129 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 RHOXF1Q8NHV9 184 aa6.51□□□□□ -1.37
SMG1-215ENST00000568239 PMM1Q92871 262 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms