RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 FRG1Q14331 258 aaKnown RBP10.33□□□□□ -0.76
CLK3-222ENST00000568232 FASTKD3Q14CZ7 662 aaKnown RBP10.33□□□□□ -0.76
CLK3-222ENST00000568232 RNPS1Q15287 305 aaKnown RBP10.33□□□□□ -0.76
CLK3-222ENST00000568232 PPP1R7Q15435 360 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 MST1LQ2TV78 715 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 SGO1Q5FBB7 561 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 PDSS1Q5T2R2 415 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 CPTPQ5TA50 214 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 FAM219BQ5XKK7 198 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 GTF2H2CQ6P1K8 395 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 PAGE2Q7Z2X7 111 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 GOLGA7Q7Z5G4 137 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 LILRA2Q8N149 483 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 PDIK1LQ8N165 341 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 L3MBTL4Q8NA19 623 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 POC1BQ8TC44 478 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 TRPC4APQ8TEL6 797 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 MTBPQ96DY7 904 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 FBXO17Q96EF6 278 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 TSPAN17Q96FV3 270 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 KLHL15Q96M94 604 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 TBL1XR1Q9BZK7 514 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 CXorf36Q9H7Y0 433 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 AHSPQ9NZD4 102 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 ING1Q9UK53 422 aaPredicted RBP10.33□□□□□ -0.76
CLK3-222ENST00000568232 ATP23Q9Y6H3 246 aa10.33□□□□□ -0.76
CLK3-222ENST00000568232 A0A1W2PRB8 838 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 OR5H1A6NKK0 313 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 CXorf49A8MYA2 514 aaPredicted RBP10.32□□□□□ -0.76
CLK3-222ENST00000568232 UGDHO60701 494 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 KERAO60938 352 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 GUCY1B2O75343 617 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 RAD51DO75771 328 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 UTS2O95399 124 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 IL33O95760 270 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 ENPP1P22413 925 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 ME2P23368 584 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 IVDP26440 423 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 OR3A2P47893 321 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 GALNT1Q10472 559 aaPredicted RBP10.32□□□□□ -0.76
CLK3-222ENST00000568232 DECR1Q16698 335 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 PFKFB4Q16877 469 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 ZSWIM7Q19AV6 140 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 PLPPR5Q32ZL2 321 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 GRAMD1BQ3KR37 738 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 CYP27C1Q4G0S4 372 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 TREML4Q6UXN2 200 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 FCRLAQ7L513 359 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 TBC1D1Q86TI0 1168 aaPredicted RBP10.32□□□□□ -0.76
CLK3-222ENST00000568232 CDYL2Q8N8U2 506 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 LINC01356Q8N9X3 169 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 GATSQ8NAP1 163 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 FAM110BQ8TC76 370 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 EXOSC8Q96B26 276 aaKnown RBP10.32□□□□□ -0.76
CLK3-222ENST00000568232 TRMOQ9BU70 441 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 LZTFL1Q9NQ48 299 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 MED17Q9NVC6 651 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 TAS2R9Q9NYW1 312 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 GMPR2Q9P2T1 348 aaKnown RBP10.32□□□□□ -0.76
CLK3-222ENST00000568232 ACOT9Q9Y305 439 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 FKBP7Q9Y680 259 aa10.32□□□□□ -0.76
CLK3-222ENST00000568232 A0A087WZY1 265 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 OR7A17O14581 309 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 EFNA2O43921 213 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 SLU7O95391 586 aaKnown RBP10.31□□□□□ -0.76
CLK3-222ENST00000568232 APEX1P27695 318 aaKnown RBP10.31□□□□□ -0.76
CLK3-222ENST00000568232 APOBEC3AP31941 199 aaPredicted RBP10.31□□□□□ -0.76
CLK3-222ENST00000568232 ARL1P40616 181 aaPredicted RBP10.31□□□□□ -0.76
CLK3-222ENST00000568232 MANFP55145 182 aaKnown RBP10.31□□□□□ -0.76
CLK3-222ENST00000568232 RAB10P61026 200 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 PRR5P85299 388 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 ZKSCAN8Q15776 578 aaPredicted RBP10.31□□□□□ -0.76
CLK3-222ENST00000568232 SWI5Q1ZZU3 235 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 KLHL17Q6TDP4 642 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 CMC1Q7Z7K0 106 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 P2RY8Q86VZ1 359 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 ZNF433Q8N7K0 673 aaPredicted RBP10.31□□□□□ -0.76
CLK3-222ENST00000568232 FBXO36Q8NEA4 188 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 ZNF418Q8TF45 676 aaPredicted RBP10.31□□□□□ -0.76
CLK3-222ENST00000568232 GRK7Q8WTQ7 553 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 CPNE4Q96A23 557 aaPredicted RBP10.31□□□□□ -0.76
CLK3-222ENST00000568232 ERP27Q96DN0 273 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 SNX18Q96RF0 628 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 GPR22Q99680 433 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 VRK1Q99986 396 aaPredicted RBP10.31□□□□□ -0.76
CLK3-222ENST00000568232 NOL11Q9H8H0 719 aaKnown RBP10.31□□□□□ -0.76
CLK3-222ENST00000568232 ANKZF1Q9H8Y5 726 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 MYNNQ9NPC7 610 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 FARSBQ9NSD9 589 aaKnown RBP10.31□□□□□ -0.76
CLK3-222ENST00000568232 NSMCE4AQ9NXX6 385 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 PCDHB10Q9UN67 800 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 SLC12A4Q9UP95 1085 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 ZNF281Q9Y2X9 895 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 SLC25A15Q9Y619 301 aa10.31□□□□□ -0.76
CLK3-222ENST00000568232 C7orf72A4D263 438 aa10.3□□□□□ -0.76
CLK3-222ENST00000568232 TRIM77I1YAP6 450 aa10.3□□□□□ -0.76
CLK3-222ENST00000568232 PLOD3O60568 738 aa10.3□□□□□ -0.76
CLK3-222ENST00000568232 LILRA1O75019 489 aa10.3□□□□□ -0.76
CLK3-222ENST00000568232 ESRRBO95718 433 aa10.3□□□□□ -0.76
CLK3-222ENST00000568232 IGKV1D-16P01601 117 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms