RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 AKAP10O43572 662 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 CGAP01215 116 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 FGF4P08620 206 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 SDC1P18827 310 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 IL11P20809 199 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 ELK4P28324 431 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 SERPINB5P36952 375 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 POU6F2P78424 691 aaPredicted RBP16.71■□□□□ 0.27
LINC01238-205ENST00000567549 PDE7AQ13946 482 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 TMEM44Q2T9K0 475 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 LSM12Q3MHD2 195 aaKnown RBP16.71■□□□□ 0.27
LINC01238-205ENST00000567549 Q5PR19 223 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 FAM219BQ5XKK7 198 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 KANK2Q63ZY3 851 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 MFSD12Q6NUT3 480 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 BHLHB9Q6PI77 547 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 SH2D5Q6ZV89 423 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 ZNF610Q8N9Z0 462 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 OR5M1Q8NGP8 315 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 MOAP1Q96BY2 351 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 USB1Q9BQ65 265 aaKnown RBP16.71■□□□□ 0.27
LINC01238-205ENST00000567549 TACO1Q9BSH4 297 aaKnown RBP16.71■□□□□ 0.27
LINC01238-205ENST00000567549 BTBD2Q9BX70 525 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 MKS1Q9NXB0 559 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 FLRT3Q9NZU0 649 aa16.71■□□□□ 0.27
LINC01238-205ENST00000567549 NAV3Q8IVL0 2385 aa16.71■□□□□ 0.26
LINC01238-205ENST00000567549 DEFB108AA8MXU0 73 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 LSM1O15116 133 aaKnown RBP16.7■□□□□ 0.26
LINC01238-205ENST00000567549 NPHS1O60500 1241 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 SS18L1O75177 396 aaPredicted RBP16.7■□□□□ 0.26
LINC01238-205ENST00000567549 LYPLA1O75608 230 aaPredicted RBP16.7■□□□□ 0.26
LINC01238-205ENST00000567549 KCNK2O95069 426 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 MAP3K8P41279 467 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 SUMO3P55854 103 aaPredicted RBP16.7■□□□□ 0.26
LINC01238-205ENST00000567549 SLC18A2Q05940 514 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 TP53BP2Q13625 1128 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 GUSBP1Q15486 140 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 PRSS53Q2L4Q9 553 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 EXOC3L2Q2M3D2 409 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 GALNTL6Q49A17 601 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 ATP6AP1LQ52LC2 224 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 CLEC9AQ6UXN8 241 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 TRABD2AQ86V40 505 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 C10orf107Q8IVU9 208 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 OR56A1Q8NGH5 318 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 OR10D3Q8NH80 312 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 OR2V1Q8NHB1 315 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 B4GALNT2Q8NHY0 566 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 CIDECQ96AQ7 238 aaPredicted RBP16.7■□□□□ 0.26
LINC01238-205ENST00000567549 HDHD5Q9BXW7 423 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 NGBQ9NPG2 151 aa16.7■□□□□ 0.26
LINC01238-205ENST00000567549 ZCCHC3Q9NUD5 404 aaKnown RBP16.7■□□□□ 0.26
LINC01238-205ENST00000567549 FAF1Q9UNN5 650 aaPredicted RBP16.7■□□□□ 0.26
LINC01238-205ENST00000567549 A0A1W2PRB8 838 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 B4DXG7 233 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 H0YC42 278 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 ADAMDEC1O15204 470 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 GMFGO60234 142 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 NUDT14O95848 222 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 LINC00032P0C843 101 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 ADH6P28332 368 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 TPD52P55327 224 aaPredicted RBP16.69■□□□□ 0.26
LINC01238-205ENST00000567549 MAD2L1Q13257 205 aaPredicted RBP16.69■□□□□ 0.26
LINC01238-205ENST00000567549 RNPS1Q15287 305 aaKnown RBP16.69■□□□□ 0.26
LINC01238-205ENST00000567549 HBMQ6B0K9 141 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 ANKRD26P1Q6NSI1 321 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 Q6ZSR9 355 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 PLEKHM3Q6ZWE6 761 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 GGNQ86UU5 652 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 CXorf67Q86X51 503 aaPredicted RBP16.69■□□□□ 0.26
LINC01238-205ENST00000567549 SLC16A11Q8NCK7 471 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 OR4C3Q8NH37 302 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 FAM110BQ8TC76 370 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 TWIST2Q8WVJ9 160 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 CPNE4Q96A23 557 aaPredicted RBP16.69■□□□□ 0.26
LINC01238-205ENST00000567549 ZC3HAV1LQ96H79 300 aaKnown RBP16.69■□□□□ 0.26
LINC01238-205ENST00000567549 APOPT1Q96IL0 206 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 ZIM3Q96PE6 472 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 RTN4RQ9BZR6 473 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 CXorf56Q9H5V9 222 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 GP6Q9HCN6 339 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 MED17Q9NVC6 651 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 GPR52Q9Y2T5 361 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 DNAJC15Q9Y5T4 150 aa16.69■□□□□ 0.26
LINC01238-205ENST00000567549 ARID1AO14497 2285 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 C17orf51A8MQB3 221 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 SCAMP2O15127 329 aaKnown RBP16.68■□□□□ 0.26
LINC01238-205ENST00000567549 AQP8O94778 261 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 IGKV1D-16P01601 117 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 NUDT17P0C025 328 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 HOXB4P17483 251 aaPredicted RBP16.68■□□□□ 0.26
LINC01238-205ENST00000567549 CARD18P57730 90 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 LTBQ06643 244 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 PCLAFQ15004 111 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 DUSP5Q16690 384 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 PLPPR5Q32ZL2 321 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 SPDYE7PQ495Y7 208 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 RFTN2Q52LD8 501 aaPredicted RBP16.68■□□□□ 0.26
LINC01238-205ENST00000567549 TMEM201Q5SNT2 666 aa16.68■□□□□ 0.26
LINC01238-205ENST00000567549 FIGNL1Q6PIW4 674 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms