RNA–Protein interactions for RNA: ENST00000566493.1

UBR1-206, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-206ENST00000566493 C4orf33Q8N1A6 199 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 GTPBP8Q8N3Z3 284 aaPredicted RBP10.71□□□□□ -0.69
UBR1-206ENST00000566493 EIF1ADQ8N9N8 165 aaKnown RBP10.71□□□□□ -0.69
UBR1-206ENST00000566493 GATSQ8NAP1 163 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 SLC16A11Q8NCK7 471 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 OR2T11Q8NH01 316 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 OR4C3Q8NH37 302 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 OR10D3Q8NH80 312 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 CLHC1Q8NHS4 586 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 ACTRT2Q8TDY3 377 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 JADE3Q92613 823 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 HOXB13Q92826 284 aaPredicted RBP10.71□□□□□ -0.69
UBR1-206ENST00000566493 MTERF3Q96E29 417 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 SH3YL1Q96HL8 342 aaPredicted RBP10.71□□□□□ -0.69
UBR1-206ENST00000566493 FCRL1Q96LA6 429 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 SMR3AQ99954 134 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 EML4Q9HC35 981 aaKnown RBP10.71□□□□□ -0.69
UBR1-206ENST00000566493 PLSCR4Q9NRQ2 329 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 GLRX2Q9NS18 164 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 NTMQ9P121 344 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 BAIAP2L1Q9UHR4 511 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 CLEC4AQ9UMR7 237 aa10.71□□□□□ -0.69
UBR1-206ENST00000566493 NIPBLQ6KC79 2804 aaeCLIP10.7□□□□□ -0.7
UBR1-206ENST00000566493 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 A0A1W2PRB8 838 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 C7orf72A4D263 438 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 TMEM114B3SHH9 223 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 CXCL13O43927 109 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 SS18L1O75177 396 aaPredicted RBP10.7□□□□□ -0.7
UBR1-206ENST00000566493 OPN1LWP04000 364 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 ACP2P11117 423 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 MAPK1P28482 360 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 CCKARP32238 428 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 RPL3P39023 403 aaKnown RBP10.7□□□□□ -0.7
UBR1-206ENST00000566493 FRKP42685 505 aaPredicted RBP10.7□□□□□ -0.7
UBR1-206ENST00000566493 SLC6A8P48029 635 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 RAC1P63000 192 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 POU6F2P78424 691 aaPredicted RBP10.7□□□□□ -0.7
UBR1-206ENST00000566493 PDE7AQ13946 482 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 DUSP5Q16690 384 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 ZNF385BQ569K4 471 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 KANK2Q63ZY3 851 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 HBMQ6B0K9 141 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 PRSS57Q6UWY2 283 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 LRIG3Q6UXM1 1119 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 ESPNLQ6ZVH7 1005 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 KRTAP1-3Q8IUG1 177 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 OR2V1Q8NHB1 315 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 B4GALNT2Q8NHY0 566 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 FAM110BQ8TC76 370 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 EPS8L3Q8TE67 593 aaKnown RBP10.7□□□□□ -0.7
UBR1-206ENST00000566493 GIMAP5Q96F15 307 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 C16orf58Q96GQ5 468 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 REXO5Q96IC2 774 aaKnown RBP10.7□□□□□ -0.7
UBR1-206ENST00000566493 RNF145Q96MT1 663 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 BDH2Q9BUT1 245 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 GATA5Q9BWX5 397 aaPredicted RBP10.7□□□□□ -0.7
UBR1-206ENST00000566493 BTBD2Q9BX70 525 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 ZCCHC3Q9NUD5 404 aaKnown RBP10.7□□□□□ -0.7
UBR1-206ENST00000566493 MED17Q9NVC6 651 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 TRAF6Q9Y4K3 522 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 DNAJC15Q9Y5T4 150 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 ACANP16112 2415 aa10.7□□□□□ -0.7
UBR1-206ENST00000566493 A0A1W2PQD3 144 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 TNFSF11O14788 317 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 LSM1O15116 133 aaKnown RBP10.69□□□□□ -0.7
UBR1-206ENST00000566493 ADAMDEC1O15204 470 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 HEXAP06865 529 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 FGF4P08620 206 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 PABPC4LP0CB38 370 aaKnown RBP10.69□□□□□ -0.7
UBR1-206ENST00000566493 BCKDHAP12694 445 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 IL11P20809 199 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 EFNA1P20827 205 aaPredicted RBP10.69□□□□□ -0.7
UBR1-206ENST00000566493 ATP6V1C1P21283 382 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 EIF1P41567 113 aaKnown RBP10.69□□□□□ -0.7
UBR1-206ENST00000566493 CARD18P57730 90 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 PCLAFQ15004 111 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 MLC1Q15049 377 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 PLPPR5Q32ZL2 321 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 BEX5Q5H9J7 111 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 BEND4Q6ZU67 534 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 PLEKHM3Q6ZWE6 761 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 YTHDF3Q7Z739 585 aaKnown RBP10.69□□□□□ -0.7
UBR1-206ENST00000566493 LILRA2Q8N149 483 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 ZNF527Q8NB42 609 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 PHOSPHO1Q8TCT1 267 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 TWIST2Q8WVJ9 160 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 PERPQ96FX8 193 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 PPP3R2Q96LZ3 170 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 Q96MF0 132 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 STACQ99469 402 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 HOXD1Q9GZZ0 328 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 TUBB1Q9H4B7 451 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 TMEM185BQ9H7F4 350 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 TIGARQ9NQ88 270 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 SNX8Q9Y5X2 465 aa10.69□□□□□ -0.7
UBR1-206ENST00000566493 FLNAP21333 2647 aaKnown RBP10.69□□□□□ -0.7
UBR1-206ENST00000566493 TLDC2A0PJX2 215 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 GJE1A6NN92 205 aa10.68□□□□□ -0.7
UBR1-206ENST00000566493 H3BNH8 94 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms