RNA–Protein interactions for RNA: ENST00000565370.1

SPG7-211, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 686 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-211ENST00000565370 OR4C3Q8NH37 302 aa11.12□□□□□ -0.63
SPG7-211ENST00000565370 B4GALNT2Q8NHY0 566 aa11.12□□□□□ -0.63
SPG7-211ENST00000565370 PIWIL2Q8TC59 973 aaKnown RBP11.12□□□□□ -0.63
SPG7-211ENST00000565370 PHOSPHO1Q8TCT1 267 aa11.12□□□□□ -0.63
SPG7-211ENST00000565370 LRRC8CQ8TDW0 803 aa11.12□□□□□ -0.63
SPG7-211ENST00000565370 DYDC1Q8WWB3 177 aa11.12□□□□□ -0.63
SPG7-211ENST00000565370 SMPDL3BQ92485 455 aa11.12□□□□□ -0.63
SPG7-211ENST00000565370 RNASE6Q93091 150 aaKnown RBP11.12□□□□□ -0.63
SPG7-211ENST00000565370 SH3YL1Q96HL8 342 aaPredicted RBP11.12□□□□□ -0.63
SPG7-211ENST00000565370 ATP6V1G3Q96LB4 118 aa11.12□□□□□ -0.63
SPG7-211ENST00000565370 UCN2Q96RP3 112 aa11.12□□□□□ -0.63
SPG7-211ENST00000565370 ZNF559Q9BR84 538 aa11.12□□□□□ -0.63
SPG7-211ENST00000565370 RTN4RQ9BZR6 473 aa11.12□□□□□ -0.63
SPG7-211ENST00000565370 KCNN3Q9UGI6 736 aa11.12□□□□□ -0.63
SPG7-211ENST00000565370 AP4B1Q9Y6B7 739 aa11.12□□□□□ -0.63
SPG7-211ENST00000565370 ANKHD1Q8IWZ3 2542 aaKnown RBP11.12□□□□□ -0.63
SPG7-211ENST00000565370 DOCK7Q96N67 2140 aa11.12□□□□□ -0.63
SPG7-211ENST00000565370 CSMD1Q96PZ7 3565 aa11.12□□□□□ -0.63
SPG7-211ENST00000565370 UQCRHLA0A096LP55 91 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 GOLGA8QA0A0J9YX86 632 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 C7orf72A4D263 438 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 GOLGA8OA6NCC3 632 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 SLC22A20A6NK97 555 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 KDM4EB2RXH2 506 aaPredicted RBP11.11□□□□□ -0.63
SPG7-211ENST00000565370 B4DXG7 233 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 GOLGA8NF8WBI6 632 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 CPSF4O95639 269 aaKnown RBP11.11□□□□□ -0.63
SPG7-211ENST00000565370 NUDT14O95848 222 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 ALDOCP09972 364 aaKnown RBP11.11□□□□□ -0.63
SPG7-211ENST00000565370 MATN1P21941 496 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 CPA2P48052 419 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 NME5P56597 212 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 B3GALT5-AS1P59052 145 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 RPS26P62854 115 aaKnown RBP11.11□□□□□ -0.63
SPG7-211ENST00000565370 TXNL4AP83876 142 aaKnown RBP11.11□□□□□ -0.63
SPG7-211ENST00000565370 TLE4Q04727 773 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 GSTA3Q16772 222 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 APOOLQ6UXV4 268 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 C6orf120Q7Z4R8 191 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 ZAR1Q86SH2 424 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 ADGRE4PQ86SQ3 457 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 KIF18BQ86Y91 864 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 WDR75Q8IWA0 830 aaKnown RBP11.11□□□□□ -0.63
SPG7-211ENST00000565370 TMCO5AQ8N6Q1 288 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 OR5D16Q8NGK9 328 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 ACTRT2Q8TDY3 377 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 NUDT8Q8WV74 236 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 WDR55Q9H6Y2 383 aaPredicted RBP11.11□□□□□ -0.63
SPG7-211ENST00000565370 PAQR5Q9NXK6 330 aaPredicted RBP11.11□□□□□ -0.63
SPG7-211ENST00000565370 BTNL2Q9UIR0 455 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 MED12Q93074 2177 aa11.11□□□□□ -0.63
SPG7-211ENST00000565370 HMGB1P1B2RPK0 211 aaPredicted RBP11.1□□□□□ -0.63
SPG7-211ENST00000565370 GTPBP1O00178 669 aaKnown RBP11.1□□□□□ -0.63
SPG7-211ENST00000565370 ANKRD28O15084 1053 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 DIAPH2O60879 1101 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 STX11O75558 287 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 RCBTB2O95199 551 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 PGRP06401 933 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 CRHP06850 196 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 UBL4AP11441 157 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 ELK4P28324 431 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 EIF1P41567 113 aaKnown RBP11.1□□□□□ -0.63
SPG7-211ENST00000565370 ATP12AP54707 1039 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 STX1BP61266 288 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 FGFBP1Q14512 234 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 SGCBQ16585 318 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 PLPPR5Q32ZL2 321 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 FBXL19-AS1Q494R0 122 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 PDCD4Q53EL6 469 aaKnown RBP11.1□□□□□ -0.63
SPG7-211ENST00000565370 SAXO2Q658L1 398 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 PPP4R4Q6NUP7 873 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 ARSKQ6UWY0 536 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 TMEM200AQ86VY9 491 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 GCNT2Q8N0V5 402 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 GTPBP8Q8N3Z3 284 aaPredicted RBP11.1□□□□□ -0.63
SPG7-211ENST00000565370 CHDHQ8NE62 594 aaPredicted RBP11.1□□□□□ -0.63
SPG7-211ENST00000565370 TOR1AIP2Q8NFQ8 470 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 OR5M1Q8NGP8 315 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 MIPOL1Q8TD10 442 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 OIT3Q8WWZ8 545 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 ZNF75CPQ92670 426 aaPredicted RBP11.1□□□□□ -0.63
SPG7-211ENST00000565370 ARL8AQ96BM9 186 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 MAELQ96JY0 434 aaKnown RBP11.1□□□□□ -0.63
SPG7-211ENST00000565370 C7orf26Q96N11 449 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 CCDC115Q96NT0 180 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 PANX1Q96RD7 426 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 SH3GL2Q99962 352 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 SLC35A5Q9BS91 424 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 NMUR2Q9GZQ4 415 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 OR51I1Q9H343 314 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 PIGMQ9H3S5 423 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 MCCC2Q9HCC0 563 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 POLE3Q9NRF9 147 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 MED17Q9NVC6 651 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 ZNF337Q9Y3M9 751 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 ZNF175Q9Y473 711 aa11.1□□□□□ -0.63
SPG7-211ENST00000565370 KIAA1549Q9HCM3 1950 aa11.09□□□□□ -0.63
SPG7-211ENST00000565370 NPIPA5A0A0B4J1W7 369 aa11.09□□□□□ -0.63
SPG7-211ENST00000565370 NPIPA7E9PJI5 369 aa11.09□□□□□ -0.63
SPG7-211ENST00000565370 EIF1AYO14602 144 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms