RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 ADAM10O14672 748 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 PEX1O43933 1283 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 HS6ST1O60243 411 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 ADAM11O75078 769 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 NGFRP08138 427 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 FBXO45P0C2W1 286 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 PRG2P13727 222 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 ZNF26P17031 533 aaPredicted RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 SOX3P41225 446 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 ST13P50502 369 aaKnown RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 SPIBQ01892 262 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 PIN1Q13526 163 aaPredicted RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 EFR3AQ14156 821 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 NDUFAF6Q330K2 333 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 DCAF10Q5QP82 559 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 CMIPQ8IY22 773 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 HS3ST5Q8IZT8 346 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 GATSQ8NAP1 163 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 POGLUT1Q8NBL1 392 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 OR5M3Q8NGP4 307 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 OR5K1Q8NHB7 308 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 BRIX1Q8TDN6 353 aaKnown RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 ARSGQ96EG1 525 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 MCHR1Q99705 422 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 BARD1Q99728 777 aaKnown RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 TACO1Q9BSH4 297 aaKnown RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 C9orf16Q9BUW7 83 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 ARMC7Q9H6L4 198 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 REEP1Q9H902 201 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 CTPS2Q9NRF8 586 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 ACER3Q9NUN7 267 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 LYVE1Q9Y5Y7 322 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 FREM3P0C091 2139 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 A0A1W2PQD3 144 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 CPSF4LA6NMK7 179 aaKnown RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 ALG1L2C9J202 215 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 ADAMDEC1O15204 470 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 OIP5O43482 229 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 CSTAP01040 98 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 UBTFL6P0CB48 400 aaPredicted RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 HPGDP15428 266 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 DNAJA1P31689 397 aaKnown RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 EVI2BP34910 448 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 ACAA2P42765 397 aaKnown RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 CDH12P55289 794 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 NTRK2Q16620 822 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 ZSWIM7Q19AV6 140 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 ENTPD8Q5MY95 495 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 SWT1Q5T5J6 900 aaKnown RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 B3GNTL1Q67FW5 361 aaPredicted RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 ANKRD34AQ69YU3 496 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 NUP54Q7Z3B4 507 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 MARCH3Q86UD3 253 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 CYP4Z1Q86W10 505 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 SIRT6Q8N6T7 355 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 CATSPER1Q8NEC5 780 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 FAM71CQ8NEG0 241 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 OR4C15Q8NGM1 316 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 OR52J3Q8NH60 311 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 GRHL3Q8TE85 626 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 RNF138Q8WVD3 245 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 PSMF1Q92530 271 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 SPACA9Q96E40 222 aaPredicted RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 THOC3Q96J01 351 aaKnown RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 DHRS1Q96LJ7 313 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 PRRC1Q96M27 445 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 EPYCQ99645 322 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 EVA1AQ9H8M9 152 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 SLC35A3Q9Y2D2 325 aa9.32□□□□□ -0.92
SMG1-208ENST00000563448 YARS2Q9Y2Z4 477 aaKnown RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 SAMHD1Q9Y3Z3 626 aaKnown RBP9.32□□□□□ -0.92
SMG1-208ENST00000563448 C17orf51A8MQB3 221 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 G3V2T6 193 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 TNFRSF11BO00300 401 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 AP3D1O14617 1153 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 NKX2-8O15522 239 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 TLX3O43711 291 aaPredicted RBP9.31□□□□□ -0.92
SMG1-208ENST00000563448 E2F6O75461 281 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 OR6B1O95007 311 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 GADD45GO95257 159 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 THY1P04216 161 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 FPR1P21462 350 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 HTR2AP28223 471 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 LIMS1P48059 325 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 TMED10P49755 219 aaKnown RBP9.31□□□□□ -0.92
SMG1-208ENST00000563448 HMGA2P52926 109 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 LAPTM4AQ15012 233 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 EXOC3L2Q2M3D2 409 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 ZNF791Q3KP31 576 aaPredicted RBP9.31□□□□□ -0.92
SMG1-208ENST00000563448 PPP4R4Q6NUP7 873 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 SHQ1Q6PI26 577 aaKnown RBP9.31□□□□□ -0.92
SMG1-208ENST00000563448 ZBTB49Q6ZSB9 765 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 SVOPLQ8N434 492 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 GALNT4Q8N4A0 578 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 CBR4Q8N4T8 237 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 PIK3C3Q8NEB9 887 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 PHOSPHO1Q8TCT1 267 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 SLC35B4Q969S0 331 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 TMCO6Q96DC7 493 aa9.31□□□□□ -0.92
SMG1-208ENST00000563448 NMNAT1Q9HAN9 279 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms