RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 MED11Q9P086 117 aa15.02■□□□□ -0
CDT1-202ENST00000562747 ITPR3Q14573 2671 aa15.02□□□□□ -0.01
CDT1-202ENST00000562747 NKX2-6A6NCS4 301 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 ZIC3O60481 467 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 GUSBP08236 651 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 ZCCHC18P0CG32 403 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 CHMP24386 653 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 MSX1P28360 303 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 CDKN2CP42773 168 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 KHKP50053 298 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 ANXA11P50995 505 aaKnown RBP15.01□□□□□ -0.01
CDT1-202ENST00000562747 ATP12AP54707 1039 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 GFRA1P56159 465 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 TFF3Q07654 80 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 SF3B4Q15427 424 aaKnown RBP eCLIP15.01□□□□□ -0.019e-7■■■■□ 21.2
CDT1-202ENST00000562747 FLYWCH1Q4VC44 716 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 C1orf185Q5T7R7 199 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 ATAD3BQ5T9A4 648 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 ENPP6Q6UWR7 440 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 MTERF4Q7Z6M4 381 aaKnown RBP15.01□□□□□ -0.01
CDT1-202ENST00000562747 ULK2Q8IYT8 1036 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 RND1Q92730 232 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 ITCHQ96J02 903 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 NPHS2Q9NP85 383 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 ALKBH4Q9NXW9 302 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 COQ3Q9NZJ6 369 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 FAM215AQ9Y5M1 114 aa15.01□□□□□ -0.01
CDT1-202ENST00000562747 PHF3Q92576 2039 aaKnown RBP15□□□□□ -0.01
CDT1-202ENST00000562747 ZNF469Q96JG9 3925 aaPredicted RBP15□□□□□ -0.01
CDT1-202ENST00000562747 FAM90A27PA6NNH2 459 aa15□□□□□ -0.01
CDT1-202ENST00000562747 NPIPB9F8W1W9 429 aa15□□□□□ -0.01
CDT1-202ENST00000562747 STX11O75558 287 aa15□□□□□ -0.01
CDT1-202ENST00000562747 ANP32DO95626 131 aa15□□□□□ -0.01
CDT1-202ENST00000562747 KRT75O95678 551 aa15□□□□□ -0.01
CDT1-202ENST00000562747 OR12D1P0DN82 309 aa15□□□□□ -0.01
CDT1-202ENST00000562747 CPN1P15169 458 aa15□□□□□ -0.01
CDT1-202ENST00000562747 MAGEA8P43361 318 aa15□□□□□ -0.01
CDT1-202ENST00000562747 CASP9P55211 416 aa15□□□□□ -0.01
CDT1-202ENST00000562747 RCAN2Q14206 197 aa15□□□□□ -0.01
CDT1-202ENST00000562747 SQLEQ14534 574 aa15□□□□□ -0.01
CDT1-202ENST00000562747 GLYR1Q49A26 553 aaPredicted RBP15□□□□□ -0.01
CDT1-202ENST00000562747 TIGD2Q4W5G0 525 aa15□□□□□ -0.01
CDT1-202ENST00000562747 KLHL26Q53HC5 615 aa15□□□□□ -0.01
CDT1-202ENST00000562747 RTL6Q6ICC9 239 aa15□□□□□ -0.01
CDT1-202ENST00000562747 TNFAIP8L2Q6P589 184 aaPredicted RBP15□□□□□ -0.01
CDT1-202ENST00000562747 C16orf62Q7Z3J2 963 aa15□□□□□ -0.01
CDT1-202ENST00000562747 XAGE5Q8WWM1 108 aa15□□□□□ -0.01
CDT1-202ENST00000562747 OIT3Q8WWZ8 545 aa15□□□□□ -0.01
CDT1-202ENST00000562747 C1GALT1C1Q96EU7 318 aa15□□□□□ -0.01
CDT1-202ENST00000562747 WDYHV1Q96HA8 205 aa15□□□□□ -0.01
CDT1-202ENST00000562747 SFXN2Q96NB2 322 aa15□□□□□ -0.01
CDT1-202ENST00000562747 TTYH2Q9BSA4 534 aa15□□□□□ -0.01
CDT1-202ENST00000562747 UCK2Q9BZX2 261 aa15□□□□□ -0.01
CDT1-202ENST00000562747 NMUR2Q9GZQ4 415 aa15□□□□□ -0.01
CDT1-202ENST00000562747 ZNF350Q9GZX5 532 aa15□□□□□ -0.01
CDT1-202ENST00000562747 POLE3Q9NRF9 147 aa15□□□□□ -0.01
CDT1-202ENST00000562747 DCTN4Q9UJW0 460 aa15□□□□□ -0.01
CDT1-202ENST00000562747 TRIM33Q9UPN9 1127 aa15□□□□□ -0.01
CDT1-202ENST00000562747 CAMK2AQ9UQM7 478 aa15□□□□□ -0.01
CDT1-202ENST00000562747 FAM47E-STBD1D6RA91 191 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 H3BNH8 94 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 LINC01387J3KSC0 135 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 GSNP06396 782 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 HK1P19367 917 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 NUP107P57740 925 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 PMPCAQ10713 525 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 DCST1Q5T197 706 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 AP1ARQ63HQ0 302 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 BLOC1S3Q6QNY0 202 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 RNF130Q86XS8 419 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 FUNDC1Q8IVP5 155 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 GATSQ8NAP1 163 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 RFWD2Q8NHY2 731 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 ZFP90Q8TF47 636 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 ASB5Q8WWX0 329 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 VPS33AQ96AX1 596 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 THOC1Q96FV9 657 aaKnown RBP14.99□□□□□ -0.01
CDT1-202ENST00000562747 POM121Q96HA1 1249 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 RABEP2Q9H5N1 569 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 CCDC134Q9H6E4 229 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 CCDC167Q9P0B6 97 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 RNF6Q9Y252 685 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 RPH3AQ9Y2J0 694 aaPredicted RBP14.99□□□□□ -0.01
CDT1-202ENST00000562747 DTNAQ9Y4J8 743 aa14.99□□□□□ -0.01
CDT1-202ENST00000562747 A0A087WZY1 265 aa14.98□□□□□ -0.01
CDT1-202ENST00000562747 NPIPA5A0A0B4J1W7 369 aa14.98□□□□□ -0.01
CDT1-202ENST00000562747 A0A0G2JND7 137 aa14.98□□□□□ -0.01
CDT1-202ENST00000562747 NPIPA7E9PJI5 369 aa14.98□□□□□ -0.01
CDT1-202ENST00000562747 HMGN4O00479 90 aa14.98□□□□□ -0.01
CDT1-202ENST00000562747 TOXO94900 526 aa14.98□□□□□ -0.01
CDT1-202ENST00000562747 EPPINO95925 133 aa14.98□□□□□ -0.01
CDT1-202ENST00000562747 NPIPA8P0DM63 369 aa14.98□□□□□ -0.01
CDT1-202ENST00000562747 GLI4P10075 376 aa14.98□□□□□ -0.01
CDT1-202ENST00000562747 TROVE2P10155 538 aaKnown RBP eCLIP14.98□□□□□ -0.01
CDT1-202ENST00000562747 LHX2P50458 406 aa14.98□□□□□ -0.01
CDT1-202ENST00000562747 B3GALT5-AS1P59052 145 aa14.98□□□□□ -0.01
CDT1-202ENST00000562747 CD226Q15762 336 aa14.98□□□□□ -0.01
CDT1-202ENST00000562747 ZNF141Q15928 474 aa14.98□□□□□ -0.01
CDT1-202ENST00000562747 BCL2A1Q16548 175 aa14.98□□□□□ -0.01
CDT1-202ENST00000562747 KRTAP21-3Q3LHN1 58 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms