RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 FOXM1Q08050 763 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 IFFO1Q0D2I5 559 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 CHIT1Q13231 466 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 TSTA3Q13630 321 aaPredicted RBP4.22□□□□□ -1.73
SMG1-206ENST00000562668 NAA25Q14CX7 972 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 CCDC153Q494R4 210 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 GGTA1PQ4G0N0 100 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 TCTE1Q5JU00 501 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 AGBL2Q5U5Z8 902 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 KLC3Q6P597 504 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 FAM199XQ6PEV8 388 aaPredicted RBP4.22□□□□□ -1.73
SMG1-206ENST00000562668 FAM198BQ6UWH4 519 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 PRSS41Q7RTY9 318 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 SMIM29Q86T20 159 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 TMPRSS11BQ86T26 416 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 SYVN1Q86TM6 617 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 ASPGQ86U10 573 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 C10orf107Q8IVU9 208 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.22□□□□□ -1.73
SMG1-206ENST00000562668 RNF175Q8N4F7 328 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 TEX9Q8N6V9 391 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 AMER3Q8N944 861 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 OR4F6Q8NGB9 312 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 WDR20Q8TBZ3 569 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 RDH11Q8TC12 318 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 AGAP11Q8TF27 550 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 ZNF473Q8WTR7 871 aaKnown RBP4.22□□□□□ -1.73
SMG1-206ENST00000562668 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.22□□□□□ -1.73
SMG1-206ENST00000562668 FGF11Q92914 225 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 QRFPRQ96P65 431 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 FAM111AQ96PZ2 611 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 SELENOSQ9BQE4 189 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 CRB3Q9BUF7 120 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 CAPS2Q9BXY5 557 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 ZNF717Q9BY31 904 aaPredicted RBP4.22□□□□□ -1.73
SMG1-206ENST00000562668 NOL11Q9H8H0 719 aaKnown RBP4.22□□□□□ -1.73
SMG1-206ENST00000562668 CNOT10Q9H9A5 744 aaKnown RBP4.22□□□□□ -1.73
SMG1-206ENST00000562668 LHX9Q9NQ69 397 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 ABCF3Q9NUQ8 709 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 SENP1Q9P0U3 644 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 NLKQ9UBE8 527 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 OPTCQ9UBM4 332 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 DHCR7Q9UBM7 475 aaKnown RBP4.22□□□□□ -1.73
SMG1-206ENST00000562668 RNF11Q9Y3C5 154 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 PAM16Q9Y3D7 125 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 CLDN16Q9Y5I7 305 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 KCNE2Q9Y6J6 123 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 DMXL2Q8TDJ6 3036 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 CCDC88CQ9P219 2028 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 ZZEF1O43149 2961 aa4.22□□□□□ -1.73
SMG1-206ENST00000562668 ITPR1Q14643 2758 aa4.21□□□□□ -1.73
SMG1-206ENST00000562668 UQCRHLA0A096LP55 91 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 LRIT2A6NDA9 550 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 TMEM8BA6NDV4 472 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 VSTM2BA6NLU5 285 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 OR1F1O43749 312 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 GALR3O60755 368 aaPredicted RBP4.21□□□□□ -1.74
SMG1-206ENST00000562668 SMIM24O75264 130 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 OR4F21O95013 312 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 SCELO95171 688 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 CGAP01215 116 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 UQCRHP07919 91 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 SERPINA6P08185 405 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 MYL2P10916 166 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 LIFP15018 202 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 CPA3P15088 417 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 TAC1P20366 129 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 HNF4AP41235 474 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 PPM1FP49593 454 aaPredicted RBP4.21□□□□□ -1.74
SMG1-206ENST00000562668 NAGLUP54802 743 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 FOXA1P55317 472 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 IRF8Q02556 426 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 FAM53BQ14153 422 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 RBM39Q14498 530 aaKnown RBP4.21□□□□□ -1.74
SMG1-206ENST00000562668 UGT3A2Q3SY77 523 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 XKR6Q5GH73 641 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 TCHHL1Q5QJ38 904 aaPredicted RBP4.21□□□□□ -1.74
SMG1-206ENST00000562668 FAM69BQ5VUD6 431 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 GARNL3Q5VVW2 1013 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 LIPJQ5W064 366 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 CYB5D1Q6P9G0 228 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 TMIGD1Q6UXZ0 262 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 CROCCP2Q86T23 111 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 TMEM126BQ8IUX1 230 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 SLC22A9Q8IVM8 553 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 CACNA2D3Q8IZS8 1091 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 CSNK1A1LQ8N752 337 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 SNX31Q8N9S9 440 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 ZNF248Q8NDW4 579 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 SETD9Q8NE22 299 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 OR7G3Q8NG95 312 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 UTP15Q8TED0 518 aaKnown RBP4.21□□□□□ -1.74
SMG1-206ENST00000562668 TRPC4APQ8TEL6 797 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 CT55Q8WUE5 264 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 SNRNP27Q8WVK2 155 aaKnown RBP4.21□□□□□ -1.74
SMG1-206ENST00000562668 SLC13A3Q8WWT9 602 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 MS4A6EQ96DS6 147 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 C11orf24Q96F05 449 aaPredicted RBP4.21□□□□□ -1.74
SMG1-206ENST00000562668 ATP6V1G3Q96LB4 118 aa4.21□□□□□ -1.74
SMG1-206ENST00000562668 ZNF385AQ96PM9 386 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms