RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 PLA2G4CQ9UP65 541 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 SCML2Q9UQR0 700 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 STRAPQ9Y3F4 350 aaKnown RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 ZNF292O60281 2723 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 MYO5AQ9Y4I1 1855 aaKnown RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 RIF1Q5UIP0 2472 aaKnown RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 KIAA1217Q5T5P2 1943 aa3.15□□□□□ -1.91
HERC1-215ENST00000561436 ASH1LQ9NR48 2969 aaKnown RBP3.15□□□□□ -1.91
HERC1-215ENST00000561436 MCM3APO60318 1980 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 DMDP11532 3685 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 BRWD1Q9NSI6 2320 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 ATP6AP2A0A1C7CYW4 349 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 SERINC4A6NH21 518 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 LMO7DNF2Z398 122 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 F8VP50 259 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 K7EQD1 137 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 TNFSF12O43508 249 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 VEGFDO43915 354 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 KIAA0513O60268 411 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 LRCH4O75427 683 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 BCAS2O75934 225 aaPredicted RBP3.14□□□□□ -1.91
HERC1-215ENST00000561436 EPOP01588 193 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 NUDT17P0C025 328 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 TPBGLP0DKB5 382 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 RALAP11233 206 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 ADSSP30520 456 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 FCGR2BP31994 310 aaPredicted RBP3.14□□□□□ -1.91
HERC1-215ENST00000561436 FCGR2CP31995 323 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 ACADVLP49748 655 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 ACOT2P49753 483 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 DUSP3P51452 185 aaPredicted RBP3.14□□□□□ -1.91
HERC1-215ENST00000561436 CRYBA2P53672 197 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 ADARP55265 1226 aaKnown RBP3.14□□□□□ -1.91
HERC1-215ENST00000561436 GSCP56915 257 aaPredicted RBP3.14□□□□□ -1.91
HERC1-215ENST00000561436 TNNC1P63316 161 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 SPAG1Q07617 926 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 EIF3IQ13347 325 aaKnown RBP3.14□□□□□ -1.91
HERC1-215ENST00000561436 KIAA0141Q14154 515 aaPredicted RBP3.14□□□□□ -1.91
HERC1-215ENST00000561436 MEF2DQ14814 521 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 FAM189A2Q15884 450 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 CARTPTQ16568 116 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 HFEQ30201 348 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 CCDC40Q4G0X9 1142 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 MPPE1Q53F39 396 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 FAAP20Q6NZ36 180 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 PLBD1Q6P4A8 553 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 SLC39A4Q6P5W5 647 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 C3P1Q6ZMU1 363 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 NOTCH2NLQ7Z3S9 236 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 GPBP1Q86WP2 473 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 ERICH1Q86X53 443 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 TMEM25Q86YD3 366 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 C12orf56Q8IXR9 622 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 GPD1LQ8N335 351 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 FAM184AQ8NB25 1140 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 ICA1LQ8NDH6 482 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 OR52B6Q8NGF0 335 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 OR8H1Q8NGG4 311 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 OR2T34Q8NGX1 318 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 SPPL2AQ8TCT8 520 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 SAP25Q8TEE9 199 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 UBTD2Q8WUN7 234 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 MYLPFQ96A32 169 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 SLCO4A1Q96BD0 722 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 SMARCD1Q96GM5 515 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 PIWIL1Q96J94 861 aaKnown RBP3.14□□□□□ -1.91
HERC1-215ENST00000561436 AGPAT1Q99943 283 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 OVOL2Q9BRP0 275 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 GPR174Q9BXC1 333 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 BBS2Q9BXC9 721 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 PINK1Q9BXM7 581 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 FGFBP2Q9BYJ0 223 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 LHX5Q9H2C1 402 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 TM9SF3Q9HD45 589 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 ZDHHC4Q9NPG8 344 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 GDF3Q9NR23 364 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 PIGVQ9NUD9 493 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 ELOVL2Q9NXB9 296 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 PSORS1C1Q9UIG5 152 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 MRPS2Q9Y399 296 aaKnown RBP3.14□□□□□ -1.91
HERC1-215ENST00000561436 PTPN13Q12923 2485 aa3.14□□□□□ -1.91
HERC1-215ENST00000561436 DENND4AQ7Z401 1863 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 EP300Q09472 2414 aaPredicted RBP3.13□□□□□ -1.91
HERC1-215ENST00000561436 A8MXQ7 604 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 ANKRD63C9JTQ0 380 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 NEDD8-MDP1E9PL57 170 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 K7ENP7 123 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 P2RX6O15547 441 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 SSX5O60225 188 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 OR6A2O95222 327 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 CPNE6O95741 557 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 SEMA4FO95754 770 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 ANGPTL1O95841 491 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 ADORA3P0DMS8 318 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 ALPPL2P10696 532 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 LMO2P25791 158 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 GJB2P29033 226 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 CSNK1EP49674 416 aaKnown RBP3.13□□□□□ -1.91
HERC1-215ENST00000561436 FHITP49789 147 aa3.13□□□□□ -1.91
HERC1-215ENST00000561436 NDST2P52849 883 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms