RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	PLPPR5	Q32ZL2	321 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	UGT3A2	Q3SY77	523 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	CLEC6A	Q6EIG7	209 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	GTF2IRD2B	Q6EKJ0	949 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	ANKRD26P1	Q6NSI1	321 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	MFSD12	Q6NUT3	480 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	GTF2IRD2	Q86UP8	949 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	TRABD2A	Q86V40	505 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	TDRP	Q86YL5	185 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	MISP	Q8IVT2	679 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	CEP112	Q8N8E3	955 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	ZFP28	Q8NHY6	868 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	POC1B	Q8TC44	478 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	SLC9A6	Q92581	669 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	OSTF1	Q92882	214 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	ZBED6CL	Q96FA7	236 aa	Predicted RBP	12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	C16orf58	Q96GQ5	468 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	EQTN	Q9NQ60	294 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	MED17	Q9NVC6	651 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	SH3BP4	Q9P0V3	963 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	BAIAP2L1	Q9UHR4	511 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	MCTS1	Q9ULC4	181 aa	Known RBP	12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	GPR52	Q9Y2T5	361 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	DNAJC15	Q9Y5T4	150 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	FBN3	Q75N90	2809 aa		12.2	□□□□□ -0.46
RNF31-223	ENST00000560754	SON	P18583	2426 aa	Known RBP	12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	AZIN1	O14977	448 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	EFNA2	O43921	213 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	CXCL13	O43927	109 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	GMFG	O60234	142 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	CNOT4	O95628	575 aa	Known RBP	12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	HSPA4L	O95757	839 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	OPN1LW	P04000	364 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	LINGO3	P0C6S8	592 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	PSMB1	P20618	241 aa	Known RBP	12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	PTH2R	P49190	550 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	CARD18	P57730	90 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	CAPRIN1	Q14444	709 aa	Known RBP	12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	EXOC3L2	Q2M3D2	409 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	LIPM	Q5VYY2	423 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	ADAM5	Q6NVV9	412 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	FIGNL1	Q6PIW4	674 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	GALNT10	Q86SR1	603 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	PRIMA1	Q86XR5	153 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	ZNF611	Q8N823	705 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	EIF1AD	Q8N9N8	165 aa	Known RBP	12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	OR2V1	Q8NHB1	315 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	PPCDC	Q96CD2	204 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	PERP	Q96FX8	193 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	KLHDC3	Q9BQ90	382 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	TRMO	Q9BU70	441 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	HDHD5	Q9BXW7	423 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	C12orf65	Q9H3J6	166 aa	Known RBP	12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	FANCF	Q9NPI8	374 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	CLEC4A	Q9UMR7	237 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	TMED5	Q9Y3A6	229 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	PTGDR2	Q9Y5Y4	395 aa		12.19	□□□□□ -0.46
RNF31-223	ENST00000560754	TRIM64	A6NGJ6	449 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	TRIM64B	A6NI03	449 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	KIF2A	O00139	706 aa	Predicted RBP	12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	TNFSF11	O14788	317 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	LSM1	O15116	133 aa	Known RBP	12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	AKAP10	O43572	662 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	SOX30	O94993	753 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	SYNGR4	O95473	234 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	PLG	P00747	810 aa	Predicted RBP	12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	PLAU	P00749	431 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	SHBG	P04278	402 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	ALOX5	P09917	674 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	LINC00032	P0C843	101 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	BCKDHA	P12694	445 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	ADH6	P28332	368 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	EIF1	P41567	113 aa	Known RBP	12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	ASMT	P46597	345 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	NR1H2	P55055	460 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	KLHL26	Q53HC5	615 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	PDSS1	Q5T2R2	415 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	HBM	Q6B0K9	141 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	LRIG3	Q6UXM1	1119 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	MTERF4	Q7Z6M4	381 aa	Known RBP	12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	LILRA2	Q8N149	483 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	B4GALNT2	Q8NHY0	566 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	PSMA8	Q8TAA3	256 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	NUDT8	Q8WV74	236 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	RNF145	Q96MT1	663 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	MS4A4E	Q96PG1	132 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	TSSK3	Q96PN8	268 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	STAC	Q99469	402 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	GATA5	Q9BWX5	397 aa	Predicted RBP	12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	BTBD2	Q9BX70	525 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	PIGU	Q9H490	435 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	PPCS	Q9HAB8	311 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	DUSP22	Q9NRW4	184 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	SIRT3	Q9NTG7	399 aa	Predicted RBP	12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	ATP6V1H	Q9UI12	483 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	ACTL7B	Q9Y614	415 aa		12.18	□□□□□ -0.46
RNF31-223	ENST00000560754	COPE	O14579	308 aa		12.17	□□□□□ -0.46
RNF31-223	ENST00000560754	HS3ST1	O14792	307 aa		12.17	□□□□□ -0.46
RNF31-223	ENST00000560754	TRIM13	O60858	407 aa		12.17	□□□□□ -0.46
RNF31-223	ENST00000560754	GCM2	O75603	506 aa	Predicted RBP	12.17	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms