RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 FANK1Q8TC84 345 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 GPR151Q8TDV0 419 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 TMEM255BQ8WV15 326 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 TMEM239Q8WW34 195 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 PATE1Q8WXA2 126 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 SLC25A46Q96AG3 418 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 KIAA1143Q96AT1 154 aaPredicted RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 TMCO6Q96DC7 493 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 KLHDC7BQ96G42 594 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 CEP19Q96LK0 163 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 KCTD7Q96MP8 289 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 LRFN5Q96NI6 719 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF285Q96NJ3 590 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 PELOQ9BRX2 385 aaKnown RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 CNPPD1Q9BV87 410 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 PRR14Q9BWN1 585 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 TRIM2Q9C040 744 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 CHRNA10Q9GZZ6 450 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 PCED1AQ9H1Q7 454 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 UBQLN3Q9H347 655 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 TMEM27Q9HBJ8 222 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 SLC2A4RGQ9NR83 387 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 ABCB10Q9NRK6 738 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 INPP5EQ9NRR6 644 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 ASB6Q9NWX5 421 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 TXNL4BQ9NX01 149 aaKnown RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 H2AFY2Q9P0M6 372 aaPredicted RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF229Q9UJW7 825 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 DOLKQ9UPQ8 538 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 GSTK1Q9Y2Q3 226 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 SPIN1Q9Y657 262 aaPredicted RBP7.51□□□□□ -1.21
SMAD3-212ENST00000559937 MTCH2Q9Y6C9 303 aa7.51□□□□□ -1.21
SMAD3-212ENST00000559937 HTR3EA5X5Y0 456 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 FAM86C2PA6NEL3 165 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 BOLA2-SMG1P6H3BVE0 249 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 BHLHE40O14503 412 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 CHP2O43745 196 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 AKAP8O43823 692 aaKnown RBP7.5□□□□□ -1.21
SMAD3-212ENST00000559937 PIP5K1CO60331 668 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 HCN1O60741 890 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 LDB3O75112 727 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 DNAJB6O75190 326 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF217O75362 1048 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 NSA2O95478 260 aaKnown RBP7.5□□□□□ -1.21
SMAD3-212ENST00000559937 APOA1P02647 267 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 CT62P0C5K7 136 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 ST6GAL1P15907 406 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 BMP7P18075 431 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 CD53P19397 219 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 CFL1P23528 166 aaKnown RBP7.5□□□□□ -1.21
SMAD3-212ENST00000559937 PTBP1P26599 531 aaKnown RBP eCLIP7.5□□□□□ -1.215e-8■■■□□ 16.9
SMAD3-212ENST00000559937 HTR2AP28223 471 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 TNFSF8P32971 234 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 RPS19P39019 145 aaKnown RBP7.5□□□□□ -1.21
SMAD3-212ENST00000559937 GPR4P46093 362 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 GCGRP47871 477 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 FASLGP48023 281 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 PSPHP78330 225 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 ID2Q02363 134 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 TFF2Q03403 129 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 GAS6Q14393 721 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF141Q15928 474 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 MAPK14Q16539 360 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 CCNJQ5T5M9 372 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 SLC30A6Q6NXT4 461 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 PAQR6Q6TCH4 344 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 TMPRSS11AQ6ZMR5 421 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 SYT13Q7L8C5 426 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 CXXC5Q7LFL8 322 aaKnown RBP7.5□□□□□ -1.21
SMAD3-212ENST00000559937 ZNF550Q7Z398 422 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 MCATQ8IVS2 390 aaKnown RBP7.5□□□□□ -1.21
SMAD3-212ENST00000559937 GALNT12Q8IXK2 581 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 CADM3Q8N126 398 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 SDR16C5Q8N3Y7 309 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 POC5Q8NA72 575 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 C7orf57Q8NEG2 295 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 SLC2A12Q8TD20 617 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 ZDHHC1Q8WTX9 485 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 TM9SF4Q92544 642 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 AP3S1Q92572 193 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 TOE1Q96GM8 510 aaKnown RBP7.5□□□□□ -1.21
SMAD3-212ENST00000559937 TCTN2Q96GX1 697 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 SAMD8Q96LT4 415 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 CCNL2Q96S94 520 aaPredicted RBP7.5□□□□□ -1.21
SMAD3-212ENST00000559937 CD180Q99467 661 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 BARHL1Q9BZE3 327 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 KLHL25Q9H0H3 589 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 OR52D1Q9H346 318 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 TCEAL2Q9H3H9 227 aaPredicted RBP7.5□□□□□ -1.21
SMAD3-212ENST00000559937 FOLH1BQ9HBA9 442 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 TMEM74BQ9NUR3 256 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 ERVK13-1Q9NX77 482 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 SIDT1Q9NXL6 827 aaKnown RBP7.5□□□□□ -1.21
SMAD3-212ENST00000559937 QPCTLQ9NXS2 382 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 KCNE5Q9UJ90 142 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 CBLCQ9ULV8 474 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 CYP8B1Q9UNU6 501 aa7.5□□□□□ -1.21
SMAD3-212ENST00000559937 POLHQ9Y253 713 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms