RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 KCND3Q9UK17 655 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 CORINQ9Y5Q5 1042 aa9.97□□□□□ -0.81
CARMIL3-202ENST00000559694 PAPLNO95428 1278 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 MAOAP21397 527 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 CA5AP35218 305 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 IDUAP35475 653 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 POLR2IP36954 125 aaKnown RBP9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 YBX1P67809 324 aaKnown RBP9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 LTB4RQ15722 352 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 UGT8Q16880 541 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 VWA2Q5GFL6 755 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 MANEAQ5SRI9 462 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 SLC35F1Q5T1Q4 408 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 ZNF613Q6PF04 617 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 XKRXQ6PP77 449 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 HORMAD2Q8N7B1 307 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 MOSPD2Q8NHP6 518 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 GPBAR1Q8TDU6 330 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 CDS1Q92903 461 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 OR4K3Q96R72 315 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 CCDC32Q9BV29 185 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 TSSK6Q9BXA6 273 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 ACSS1Q9NUB1 689 aaPredicted RBP9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 GPR83Q9NYM4 423 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 HSPE1-MOB4S4R3N1 261 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 DOCK6Q96HP0 2047 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 A0A0G2JPF8 293 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 HNRNPCL3B7ZW38 293 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 C11orf98E9PRG8 122 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 JRKO75564 520 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 HMGN1P05114 100 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 ALPLP05186 524 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 HNRNPCL4P0DMR1 293 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 GPR3P46089 330 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 OXA1LQ15070 435 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 OR5M10Q6IEU7 315 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 TMEM64Q6YI46 380 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 AKAP1Q92667 903 aaKnown RBP eCLIP9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 S100A13Q99584 98 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 PRRX2Q99811 253 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 COMMD9Q9P000 198 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 MBD1Q9UIS9 605 aaPredicted RBP9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 LOXL2Q9Y4K0 774 aa9.96□□□□□ -0.81
CARMIL3-202ENST00000559694 LILRA5A6NI73 299 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 ZNF195O14628 629 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 FRS3O43559 492 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 CTNSO60931 367 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 SEC14L2O76054 403 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 RENP00797 406 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 GSTM3P21266 225 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 MAP2K3P46734 347 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 KLHL22Q53GT1 634 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 OAFQ86UD1 273 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 CHTF18Q8WVB6 975 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 CCDC74BQ96LY2 380 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 MND1Q9BWT6 205 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 UCK2Q9BZX2 261 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 C14orf105Q9NVL8 296 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 FBXO9Q9UK97 447 aaPredicted RBP9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 NXT1Q9UKK6 140 aaKnown RBP9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 TMPRSS11EQ9UL52 423 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 USP22Q9UPT9 525 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 IGHV3-20A0A0C4DH32 117 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 ARNTLO00327 626 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 GAPDHSO14556 408 aaPredicted RBP9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 SPINT1O43278 529 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 TNFSF15O95150 251 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 ARRB2P32121 409 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 ZNF81P51508 661 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 MARCH9Q86YJ5 346 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 DEDD2Q8WXF8 326 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 RFKQ969G6 155 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 HOXD1Q9GZZ0 328 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 DUSP15Q9H1R2 295 aaPredicted RBP9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 MMP28Q9H239 520 aa9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 ELL3Q9HB65 397 aaPredicted RBP9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 RPH3AQ9Y2J0 694 aaPredicted RBP9.96□□□□□ -0.82
CARMIL3-202ENST00000559694 NUP214P35658 2090 aaPredicted RBP9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 TLX2O43763 284 aaPredicted RBP9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 KDM4BO94953 1096 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 FURINP09958 794 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 BMP1P13497 986 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 ACVR2AP27037 513 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 CASP3P42574 277 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 LIPKQ5VXJ0 399 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 LIN54Q6MZP7 749 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 ZNF367Q7RTV3 350 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 NOXA1Q86UR1 476 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 OR14L1PQ8NHC6 308 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 SNIP1Q8TAD8 396 aaKnown RBP9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 NETO1Q8TDF5 533 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 MUL1Q969V5 352 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 PDCD10Q9BUL8 212 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 OR51E2Q9H255 320 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 NT5DC2Q9H857 520 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 USP36Q9P275 1121 aaKnown RBP9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 CD300AQ9UGN4 299 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 POMT2Q9UKY4 750 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 DAPP1Q9UN19 280 aa9.95□□□□□ -0.82
CARMIL3-202ENST00000559694 VDAC3Q9Y277 283 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms