RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TMEM19Q96HH6 336 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 TBL1XR1Q9BZK7 514 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 A4GALTQ9NPC4 353 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 PPP4R1LQ9P1A2 415 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 ERRFI1Q9UJM3 462 aaPredicted RBP10.38□□□□□ -0.75
SNX1-204ENST00000559061 MRTO4Q9UKD2 239 aaKnown RBP10.38□□□□□ -0.75
SNX1-204ENST00000559061 ICAM5Q9UMF0 924 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 OSGIN2Q9Y236 505 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 WDR45Q9Y484 360 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 DTNAQ9Y4J8 743 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 MYO18BQ8IUG5 2567 aa10.38□□□□□ -0.75
SNX1-204ENST00000559061 ARHGAP21Q5T5U3 1957 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 TRGV5A0A0B4J1U4 118 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 AGAP5A6NIR3 686 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 MRASO14807 208 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 ANGPT2O15123 496 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 NDUFB5O43674 189 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 GMFGO60234 142 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 SUSD5O60279 629 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 CBR3O75828 277 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 SOX30O94993 753 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 EPPINO95925 133 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 BCHEP06276 602 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 ARAFP10398 606 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 COX4I1P13073 169 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 TCEA1P23193 301 aaKnown RBP10.37□□□□□ -0.75
SNX1-204ENST00000559061 SRD5A2P31213 254 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 CA7P43166 264 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 CLDN15P56746 228 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 TXNL4AP83876 142 aaKnown RBP10.37□□□□□ -0.75
SNX1-204ENST00000559061 FADDQ13158 208 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 NFYCQ13952 458 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 FGFBP1Q14512 234 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 SLC10A1Q14973 349 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 TOMM34Q15785 309 aaPredicted RBP10.37□□□□□ -0.75
SNX1-204ENST00000559061 NHSL2Q5HYW2 709 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 C1QL3Q5VWW1 255 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 RTL6Q6ICC9 239 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 LRRC74BQ6ZQY2 392 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 CPLX4Q7Z7G2 160 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 ATCAYQ86WG3 371 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 CALHM3Q86XJ0 350 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 DOLPP1Q86YN1 238 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 ZZZ3Q8IYH5 903 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 OR5M1Q8NGP8 315 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 FBXO27Q8NI29 283 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 PHF3Q92576 2039 aaKnown RBP10.37□□□□□ -0.75
SNX1-204ENST00000559061 LRRC58Q96CX6 371 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 SH3YL1Q96HL8 342 aaPredicted RBP10.37□□□□□ -0.75
SNX1-204ENST00000559061 TREX2Q9BQ50 279 aaPredicted RBP10.37□□□□□ -0.75
SNX1-204ENST00000559061 GPATCH1Q9BRR8 931 aaKnown RBP10.37□□□□□ -0.75
SNX1-204ENST00000559061 UGT2B28Q9BY64 529 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 NSRP1Q9H0G5 558 aaKnown RBP10.37□□□□□ -0.75
SNX1-204ENST00000559061 KAT8Q9H7Z6 458 aaKnown RBP10.37□□□□□ -0.75
SNX1-204ENST00000559061 POLE3Q9NRF9 147 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 PNPLA3Q9NST1 481 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 EXD2Q9NVH0 621 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 PCDHGB3Q9Y5G1 929 aa10.37□□□□□ -0.75
SNX1-204ENST00000559061 SERINC4A6NH21 518 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 BBIP1A8MTZ0 92 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 SCDO00767 359 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 EFNA2O43921 213 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 HCN1O60741 890 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 CCDC22O60826 627 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 NTN1O95631 604 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 FAM107AO95990 144 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 AGR2O95994 175 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 LINGO3P0C6S8 592 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 BMP7P18075 431 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 IL11P20809 199 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 ATP6V1C1P21283 382 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 SLC6A2P23975 617 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 DPP4P27487 766 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 ADH7P40394 386 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 C17orf67Q0P5P2 114 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 CYLC2Q14093 348 aaPredicted RBP10.36□□□□□ -0.75
SNX1-204ENST00000559061 PLPPR5Q32ZL2 321 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 GPAT3Q53EU6 434 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 GCNT6Q5T4J0 391 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 FAM91A1Q658Y4 838 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 VASNQ6EMK4 673 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 NANOGP8Q6NSW7 305 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 C3P1Q6ZMU1 363 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 SEM1Q6ZVN7 128 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 CD163Q86VB7 1156 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 VRK2Q86Y07 508 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 ANKS4BQ8N8V4 417 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 NFKBIDQ8NI38 313 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 PRR7Q8TB68 274 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 FAM57AQ8TBR7 257 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 RELTQ969Z4 430 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 NANOGQ9H9S0 305 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 BCL2L10Q9HD36 194 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 ARL8BQ9NVJ2 186 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 TAS2R10Q9NYW0 307 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 P2RX2Q9UBL9 471 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 B4GALT7Q9UBV7 327 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.36□□□□□ -0.75
SNX1-204ENST00000559061 LIPT1Q9Y234 373 aa10.36□□□□□ -0.75
SNX1-204ENST00000559061 CARD8Q9Y2G2 431 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms