RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 TMEM101Q96IK0 257 aa2.28□□□□□ -2.04
VPS13C-207ENST00000558919 NRTNQ99748 197 aa2.28□□□□□ -2.04
VPS13C-207ENST00000558919 TXN2Q99757 166 aa2.28□□□□□ -2.04
VPS13C-207ENST00000558919 TMEM121Q9BTD3 319 aa2.28□□□□□ -2.04
VPS13C-207ENST00000558919 ACAT2Q9BWD1 397 aa2.28□□□□□ -2.04
VPS13C-207ENST00000558919 RSPH9Q9H1X1 276 aaPredicted RBP2.28□□□□□ -2.04
VPS13C-207ENST00000558919 TMEM231Q9H6L2 316 aa2.28□□□□□ -2.04
VPS13C-207ENST00000558919 GPN2Q9H9Y4 310 aaPredicted RBP2.28□□□□□ -2.04
VPS13C-207ENST00000558919 POLD4Q9HCU8 107 aa2.28□□□□□ -2.04
VPS13C-207ENST00000558919 DAZ3Q9NR90 486 aaKnown RBP2.28□□□□□ -2.04
VPS13C-207ENST00000558919 DCDC2Q9UHG0 476 aa2.28□□□□□ -2.04
VPS13C-207ENST00000558919 CRLS1Q9UJA2 301 aa2.28□□□□□ -2.04
VPS13C-207ENST00000558919 THSD7BQ9C0I4 1608 aa2.28□□□□□ -2.05
VPS13C-207ENST00000558919 CUX2O14529 1486 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 CCDC7Q96M83 1385 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 MAGEB4O15481 346 aaPredicted RBP2.27□□□□□ -2.05
VPS13C-207ENST00000558919 EFNA2O43921 213 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 SLC4A1P02730 911 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 GSTT2P0CG29 244 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 GSTT2BP0CG30 244 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 THRBP10828 461 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 UGT1A5P35504 534 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 NOVA1P51513 510 aaKnown RBP2.27□□□□□ -2.05
VPS13C-207ENST00000558919 TFDP3Q5H9I0 405 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 SLC10A5Q5PT55 438 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 LCE1BQ5T7P3 118 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 OR6B2Q6IFH4 312 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 NEK5Q6P3R8 708 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 LPCAT2Q7L5N7 544 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 RNF148Q8N7C7 305 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 ZBTB44Q8NCP5 570 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 DCUN1D4Q92564 292 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 UPRTQ96BW1 309 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 RUFY1Q96T51 708 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 SLC25A51Q9H1U9 297 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 PPDPFQ9H3Y8 114 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 ZDHHC11Q9H8X9 412 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 LPAR2Q9HBW0 351 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 C1orf123Q9NWV4 160 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 IL19Q9UHD0 177 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 RIMS3Q9UJD0 308 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 USP16Q9Y5T5 823 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 CDH10Q9Y6N8 788 aa2.27□□□□□ -2.05
VPS13C-207ENST00000558919 ASTN1O14525 1302 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 SPAG9O60271 1321 aaKnown RBP2.26□□□□□ -2.05
VPS13C-207ENST00000558919 UBE4BO95155 1302 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 IGLV3-16A0A075B6K0 115 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 A0A0J9YXY3 114 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 WASH3PC4AMC7 463 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 LGALS8O00214 317 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 SSX5O60225 188 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 ALOX5P09917 674 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 TOP1P11387 765 aaKnown RBP2.26□□□□□ -2.05
VPS13C-207ENST00000558919 UQCRBP14927 111 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 XRCC1P18887 633 aaPredicted RBP2.26□□□□□ -2.05
VPS13C-207ENST00000558919 HTR1EP28566 365 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 CD1BP29016 333 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 OAS2P29728 719 aaKnown RBP2.26□□□□□ -2.05
VPS13C-207ENST00000558919 SFNP31947 248 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 HSPA1LP34931 641 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 KRTAP10-1P60331 282 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 LRRC63Q05C16 580 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 ZNF630Q2M218 657 aaPredicted RBP2.26□□□□□ -2.05
VPS13C-207ENST00000558919 ASPHD2Q6ICH7 369 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 SCYL2Q6P3W7 929 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 WASH2PQ6VEQ5 465 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 CYS1Q717R9 158 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 LCA5Q86VQ0 697 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 MINDY2Q8NBR6 621 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 STKLD1Q8NE28 680 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 FAM71CQ8NEG0 241 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 OR2T33Q8NG76 320 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 SLC13A3Q8WWT9 602 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 IL22RA2Q969J5 263 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 PINX1Q96BK5 328 aaKnown RBP2.26□□□□□ -2.05
VPS13C-207ENST00000558919 XPO4Q9C0E2 1151 aaKnown RBP2.26□□□□□ -2.05
VPS13C-207ENST00000558919 POLR3FQ9H1D9 316 aaPredicted RBP2.26□□□□□ -2.05
VPS13C-207ENST00000558919 SH2D2AQ9NP31 389 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 FETUBQ9UGM5 382 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 CYTH4Q9UIA0 394 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 PLA2G4CQ9UP65 541 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 IFT52Q9Y366 437 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 MAB21L2Q9Y586 359 aa2.26□□□□□ -2.05
VPS13C-207ENST00000558919 LOC100131303A0A0U1RQF7 123 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 ZNF264O43296 627 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 STX11O75558 287 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 BCAS2O75934 225 aaPredicted RBP2.25□□□□□ -2.05
VPS13C-207ENST00000558919 BAG2O95816 211 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 CCDC192P0DO97 292 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 PDHBP11177 359 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 ATP5A1P25705 553 aaKnown RBP2.25□□□□□ -2.05
VPS13C-207ENST00000558919 HPDP32754 393 aaPredicted RBP2.25□□□□□ -2.05
VPS13C-207ENST00000558919 OSTNP61366 133 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 BDH1Q02338 343 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 GABPB1Q06547 395 aaPredicted RBP2.25□□□□□ -2.05
VPS13C-207ENST00000558919 EXOSC2Q13868 293 aaKnown RBP2.25□□□□□ -2.05
VPS13C-207ENST00000558919 CYB5R2Q6BCY4 276 aa2.25□□□□□ -2.05
VPS13C-207ENST00000558919 WDR74Q6RFH5 385 aaPredicted RBP2.25□□□□□ -2.05
VPS13C-207ENST00000558919 SNX32Q86XE0 403 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms