RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 CARNS1A5YM72 827 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 IDH3GP51553 393 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 PCBP4P57723 403 aaKnown RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 KIAA1958Q8N8K9 716 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 OR13C9Q8NGT0 318 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 OR4K15Q8NH41 348 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 PTPN18Q99952 460 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 POLMQ9NP87 494 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 HMX2A2RU54 273 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 SOCS6O14544 535 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 DVL2O14641 736 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CRB1P82279 1406 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 NFKB2Q00653 900 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 SMYD5Q6GMV2 418 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF227Q86WZ6 799 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 UROC1Q96N76 676 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 ZDHHC3Q9NYG2 299 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 F5P12259 2224 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CALCRP30988 508 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 SLC6A9P48067 706 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 ELOVL1Q9BW60 279 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 HRASLSQ9HDD0 168 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 APC2O95996 2303 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 ZCWPW2A0A1B0GU75 182 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 M0QYG6 137 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 RECQL4O94761 1208 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 ARSBP15848 533 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 NRMQ8IXM6 262 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 OR5AR1Q8NGP9 310 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CORO2AQ92828 525 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 SLC25A31Q9H0C2 315 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 PATZ1Q9HBE1 687 aaKnown RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 GSN-AS1Q9NRJ2 163 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 OR2A25A4D2G3 310 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 RGS11O94810 467 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CPT2P23786 658 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 FAM26EQ8N5C1 309 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CYB561A3Q8NBI2 242 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 GPR26Q8NDV2 337 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 TMEM163Q8TC26 289 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 TAPBPLQ9BX59 468 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CNOT2Q9NZN8 540 aaKnown RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 LINC00862A6NCI5 91 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 DCTN6O00399 190 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CXCL11O14625 94 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 IMPA2O14732 288 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 ANGPTL7O43827 346 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 MTX2O75431 263 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 ASGR1P07306 291 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF704Q6ZNC4 412 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 TECPR1Q7Z6L1 1165 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 OR9A1PQ8NGU1 263 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 INTS12Q96CB8 462 aaKnown RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 C1QTNF7Q9BXJ2 289 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 TCRBV16S1A1N1A0A5B0 115 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 NUDT19A8MXV4 375 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 SEC14L6B5MCN3 397 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 PRKYO43930 277 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 FIP1L1Q6UN15 594 aaKnown RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 OR52I2Q8NH67 350 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 PKDREJQ9NTG1 2253 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 MEIS3P1A6NDR6 274 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CNR1P21554 472 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 PTBP1P26599 531 aaKnown RBP eCLIP3.48□□□□□ -1.854e-18■■■■■ 40.6
ATXN3-248ENST00000558190 OR1D2P34982 312 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 PPM1AP35813 382 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 NPAS4Q8IUM7 802 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 OR4K14Q8NGD5 310 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 TEX37Q96LM6 180 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 PTCHD1Q96NR3 888 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 GNG13Q9P2W3 67 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 MFSD11O43934 449 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 LRG1P02750 347 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 ZNF44P15621 663 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CSNK2A1P68400 391 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 RAB31Q13636 194 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 GJD3Q8N144 294 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CSNK2A3Q8NEV1 391 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 MRGPRX2Q96LB1 330 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 ENY2Q9NPA8 101 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 DKKL1Q9UK85 242 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 SLC31A1O15431 190 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 PRAMEF2O60811 474 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CBX7O95931 251 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 POU3F3P20264 500 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 EPHA4P54764 986 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CEBPEQ15744 281 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 TIGD5Q53EQ6 642 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 LHFPL5Q8TAF8 219 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 SLC6A16Q9GZN6 736 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CHRDQ9H2X0 955 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 PLEKHJ1Q9NW61 149 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 TRBV4-1A0A0J9YWV2 114 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 RNF13O43567 381 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CD68P34810 354 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 NPY4RP50391 375 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 CXCL9Q07325 125 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 Q6ZVL8 140 aa3.48□□□□□ -1.85
ATXN3-248ENST00000558190 FBXO16Q8IX29 292 aaPredicted RBP3.48□□□□□ -1.85
ATXN3-248ENST00000558190 SLC35F2Q8IXU6 374 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms