RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 MSX1P28360 303 aa23.24■■□□□ 1.31
SMAD6-202ENST00000557916 SRD5A2P31213 254 aa23.24■■□□□ 1.31
SMAD6-202ENST00000557916 ZNF630Q2M218 657 aaPredicted RBP23.24■■□□□ 1.31
SMAD6-202ENST00000557916 EIPR1Q53HC9 387 aa23.24■■□□□ 1.31
SMAD6-202ENST00000557916 YRDCQ86U90 279 aaKnown RBP23.24■■□□□ 1.31
SMAD6-202ENST00000557916 FAM83FQ8NEG4 500 aaPredicted RBP23.24■■□□□ 1.31
SMAD6-202ENST00000557916 SH3YL1Q96HL8 342 aaPredicted RBP23.24■■□□□ 1.31
SMAD6-202ENST00000557916 TREX2Q9BQ50 279 aaPredicted RBP23.24■■□□□ 1.31
SMAD6-202ENST00000557916 TMEM38AQ9H6F2 299 aa23.24■■□□□ 1.31
SMAD6-202ENST00000557916 KAT8Q9H7Z6 458 aaKnown RBP23.24■■□□□ 1.31
SMAD6-202ENST00000557916 EFCAB1Q9HAE3 211 aa23.24■■□□□ 1.31
SMAD6-202ENST00000557916 DKKL1Q9UK85 242 aa23.24■■□□□ 1.31
SMAD6-202ENST00000557916 NCKAP5O14513 1909 aa23.23■■□□□ 1.31
SMAD6-202ENST00000557916 A0A1B0GVC2 190 aa23.23■■□□□ 1.31
SMAD6-202ENST00000557916 C5orf58C9J3I9 102 aa23.23■■□□□ 1.31
SMAD6-202ENST00000557916 NDUFAB1O14561 156 aa23.23■■□□□ 1.31
SMAD6-202ENST00000557916 HCRTR2O43614 444 aa23.23■■□□□ 1.31
SMAD6-202ENST00000557916 GMFGO60234 142 aa23.23■■□□□ 1.31
SMAD6-202ENST00000557916 ARAFP10398 606 aa23.23■■□□□ 1.31
SMAD6-202ENST00000557916 ENDOUP21128 410 aaKnown RBP23.23■■□□□ 1.31
SMAD6-202ENST00000557916 DSCR4P56555 118 aaPredicted RBP23.23■■□□□ 1.31
SMAD6-202ENST00000557916 EIF2S3LQ2VIR3 472 aaKnown RBP23.23■■□□□ 1.31
SMAD6-202ENST00000557916 RPS26P11Q5JNZ5 115 aaPredicted RBP23.23■■□□□ 1.31
SMAD6-202ENST00000557916 WIPI1Q5MNZ9 446 aaPredicted RBP23.23■■□□□ 1.31
SMAD6-202ENST00000557916 SPPL2CQ8IUH8 684 aa23.23■■□□□ 1.31
SMAD6-202ENST00000557916 CHERPQ8IWX8 916 aaKnown RBP23.23■■□□□ 1.31
SMAD6-202ENST00000557916 METTL25Q8N6Q8 603 aa23.23■■□□□ 1.31
SMAD6-202ENST00000557916 OR8J3Q8NGG0 315 aa23.23■■□□□ 1.31
SMAD6-202ENST00000557916 BCAS4Q8TDM0 211 aa23.23■■□□□ 1.31
SMAD6-202ENST00000557916 OR2B2Q9GZK3 357 aa23.23■■□□□ 1.31
SMAD6-202ENST00000557916 SUCOQ9UBS9 1254 aaKnown RBP23.23■■□□□ 1.31
SMAD6-202ENST00000557916 CARD8Q9Y2G2 431 aa23.23■■□□□ 1.31
SMAD6-202ENST00000557916 A0A0G2JPF8 293 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 AGAP5A6NIR3 686 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 HNRNPCL2B2RXH8 293 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 HNRNPCL3B7ZW38 293 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 HNRNPCL1O60812 293 aaKnown RBP23.22■■□□□ 1.31
SMAD6-202ENST00000557916 HNRNPCL4P0DMR1 293 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 UBL4AP11441 157 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 ZNF117Q03924 483 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 ADRM1Q16186 407 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 CYP51A1Q16850 503 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 RABL3Q5HYI8 236 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 PRAMEF8Q5VWM4 474 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 PRAMEF7Q5VXH5 474 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 EIF3MQ7L2H7 374 aaKnown RBP23.22■■□□□ 1.31
SMAD6-202ENST00000557916 FGD2Q7Z6J4 655 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 OR14L1PQ8NHC6 308 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 B4GALNT2Q8NHY0 566 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 NFKBIDQ8NI38 313 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 NEIL3Q8TAT5 605 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 TAS2R10Q9NYW0 307 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 OSGIN2Q9Y236 505 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 MRPS18CQ9Y3D5 142 aaKnown RBP23.22■■□□□ 1.31
SMAD6-202ENST00000557916 L3MBTL1Q9Y468 752 aa23.22■■□□□ 1.31
SMAD6-202ENST00000557916 DSPPQ9NZW4 1301 aa23.21■■□□□ 1.31
SMAD6-202ENST00000557916 AQP7O14520 342 aa23.21■■□□□ 1.31
SMAD6-202ENST00000557916 WISP1O95388 367 aa23.21■■□□□ 1.31
SMAD6-202ENST00000557916 ABOP16442 354 aa23.21■■□□□ 1.31
SMAD6-202ENST00000557916 PTGS2P35354 604 aa23.21■■□□□ 1.31
SMAD6-202ENST00000557916 ADH7P40394 386 aa23.21■■□□□ 1.31
SMAD6-202ENST00000557916 CDK6Q00534 326 aa23.21■■□□□ 1.31
SMAD6-202ENST00000557916 ART3Q13508 389 aa23.21■■□□□ 1.31
SMAD6-202ENST00000557916 FGFBP1Q14512 234 aa23.21■■□□□ 1.31
SMAD6-202ENST00000557916 FAM91A1Q658Y4 838 aa23.21■■□□□ 1.31
SMAD6-202ENST00000557916 PEX5LQ8IYB4 626 aa23.21■■□□□ 1.31
SMAD6-202ENST00000557916 OR10A6Q8NH74 314 aa23.21■■□□□ 1.31
SMAD6-202ENST00000557916 PRR7Q8TB68 274 aa23.21■■□□□ 1.31
SMAD6-202ENST00000557916 C1GALT1C1Q96EU7 318 aa23.21■■□□□ 1.31
SMAD6-202ENST00000557916 BCL2L10Q9HD36 194 aa23.21■■□□□ 1.31
SMAD6-202ENST00000557916 ST6GALNAC1Q9NSC7 600 aaPredicted RBP23.21■■□□□ 1.31
SMAD6-202ENST00000557916 ZNF264O43296 627 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 OIP5O43482 229 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 ZIC3O60481 467 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 SLC19A2O60779 497 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 CSTAP01040 98 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 DBIP07108 87 aaKnown RBP23.2■■□□□ 1.3
SMAD6-202ENST00000557916 SLC6A2P23975 617 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 KCNJ10P78508 379 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 SCARB2Q14108 478 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 GANABQ14697 944 aaKnown RBP23.2■■□□□ 1.3
SMAD6-202ENST00000557916 NDUFAF6Q330K2 333 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 REEP3Q6NUK4 255 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 CBLN3Q6UW01 205 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 SERPINA11Q86U17 422 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 FITM2Q8N6M3 262 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 BBS10Q8TAM1 723 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 ECSITQ9BQ95 431 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 SLC35A3Q9Y2D2 325 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 ZNF835Q9Y2P0 537 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 SLC6A5Q9Y345 797 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 ZGRF1Q86YA3 2104 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 ZNF407Q9C0G0 2248 aa23.2■■□□□ 1.3
SMAD6-202ENST00000557916 NPIPA2E9PIF3 369 aa23.19■■□□□ 1.3
SMAD6-202ENST00000557916 NPIPA3F8WFD2 350 aa23.19■■□□□ 1.3
SMAD6-202ENST00000557916 EIF4E2O60573 245 aaKnown RBP23.19■■□□□ 1.3
SMAD6-202ENST00000557916 PGM3O95394 542 aa23.19■■□□□ 1.3
SMAD6-202ENST00000557916 IL7RP16871 459 aa23.19■■□□□ 1.3
SMAD6-202ENST00000557916 HK1P19367 917 aa23.19■■□□□ 1.3
SMAD6-202ENST00000557916 RPS4Y1P22090 263 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms