RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, human

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDH11-211	ENST00000557726	OXSM	Q9NWU1	459 aa		11.44	□□□□□ -0.58
RDH11-211	ENST00000557726	BAIAP2L1	Q9UHR4	511 aa		11.44	□□□□□ -0.58
RDH11-211	ENST00000557726	CCL27	Q9Y4X3	112 aa		11.44	□□□□□ -0.58
RDH11-211	ENST00000557726	CSPG4	Q6UVK1	2322 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726		A0A0J9YW62	118 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	AZIN1	O14977	448 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	KLF4	O43474	513 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	SS18L1	O75177	396 aa	Predicted RBP	11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	CNOT4	O95628	575 aa	Known RBP	11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	THBD	P07204	575 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	TUBB	P07437	444 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	LINC00032	P0C843	101 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	SDC1	P18827	310 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	IL11	P20809	199 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	EFNA1	P20827	205 aa	Predicted RBP	11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	PRPH2	P23942	346 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	LCN1	P31025	176 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	MAP3K8	P41279	467 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	SERPINB4	P48594	390 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	PRIM2	P49643	509 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	CARD18	P57730	90 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	RPL38	P63173	70 aa	Known RBP	11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	DUSP5	Q16690	384 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	CTU2	Q2VPK5	515 aa	Known RBP	11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	PLPPR5	Q32ZL2	321 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	GALNTL6	Q49A17	601 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	CCNJ	Q5T5M9	372 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	MFSD12	Q6NUT3	480 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	ESPNL	Q6ZVH7	1005 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	ZAR1	Q86SH2	424 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	MISP	Q8IVT2	679 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	SLC16A11	Q8NCK7	471 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	B4GALNT2	Q8NHY0	566 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	KIF18A	Q8NI77	898 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	ACTRT2	Q8TDY3	377 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	UBLCP1	Q8WVY7	318 aa	Predicted RBP	11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	HOXB13	Q92826	284 aa	Predicted RBP	11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	OSTF1	Q92882	214 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	OTUB1	Q96FW1	271 aa	Predicted RBP	11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	PLPPR2	Q96GM1	343 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	C16orf58	Q96GQ5	468 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	ZNF764	Q96H86	408 aa	Predicted RBP	11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	ADGRG7	Q96K78	797 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	NPAS1	Q99742	590 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	ACTR6	Q9GZN1	396 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	UBQLN4	Q9NRR5	601 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	ACSS1	Q9NUB1	689 aa	Predicted RBP	11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	MID2	Q9UJV3	735 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	FREM1	Q5H8C1	2179 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	HIVEP2	P31629	2446 aa		11.43	□□□□□ -0.58
RDH11-211	ENST00000557726	TLN2	Q9Y4G6	2542 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	NSD1	Q96L73	2696 aa	Predicted RBP	11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	C7orf72	A4D263	438 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	KIF2A	O00139	706 aa	Predicted RBP	11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	ADAMDEC1	O15204	470 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	TBX19	O60806	448 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	NUDT14	O95848	222 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	PLAU	P00749	431 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	PABPC4L	P0CB38	370 aa	Known RBP	11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	DDX5	P17844	614 aa	Known RBP	11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	ATP6V1C1	P21283	382 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	CRHR1	P34998	444 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	SFTPD	P35247	375 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	ASMT	P46597	345 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	POU6F2	P78424	691 aa	Predicted RBP	11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	RFTN2	Q52LD8	501 aa	Predicted RBP	11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	TMEM201	Q5SNT2	666 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	ZCCHC12	Q6PEW1	402 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726		Q6ZSR9	355 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	SH2D5	Q6ZV89	423 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	TRABD2A	Q86V40	505 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	DDIAS	Q8IXT1	998 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	GSPT2	Q8IYD1	628 aa	Known RBP	11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	LILRA2	Q8N149	483 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	OR2T11	Q8NH01	316 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	FAM110B	Q8TC76	370 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	PHOSPHO1	Q8TCT1	267 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	ROBO4	Q8WZ75	1007 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	GIMAP5	Q96F15	307 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	KLHL15	Q96M94	604 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	TACO1	Q9BSH4	297 aa	Known RBP	11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	TXLNGY	Q9BZA5	131 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	TIGAR	Q9NQ88	270 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	FBXO34	Q9NWN3	711 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	NTM	Q9P121	344 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	GPR52	Q9Y2T5	361 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726	JMJD1C	Q15652	2540 aa		11.42	□□□□□ -0.58
RDH11-211	ENST00000557726		A0A1W2PQD3	144 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	NPIPB8	E9PQR5	432 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	HS3ST1	O14792	307 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	HSPA4L	O95757	839 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	SHBG	P04278	402 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	KRT4	P19013	534 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	PSMA4	P25789	261 aa	Known RBP	11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	AGTR1	P30556	359 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	HPCAL1	P37235	193 aa		11.41	□□□□□ -0.58
RDH11-211	ENST00000557726	EIF1	P41567	113 aa	Known RBP	11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms