RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 CTU2Q2VPK5 515 aaKnown RBP11.51□□□□□ -0.57
SHMT2-233ENST00000557529 KLHL26Q53HC5 615 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 DCAF12Q5T6F0 453 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 TMEM205Q6UW68 189 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 CPEB2Q7Z5Q1 589 aaKnown RBP11.51□□□□□ -0.57
SHMT2-233ENST00000557529 ZER1Q7Z7L7 766 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 SLC34A3Q8N130 599 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 ZNF441Q8N8Z8 693 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 MR1Q95460 341 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 ZNF566Q969W8 418 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 TP53INP1Q96A56 240 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 EFHD2Q96C19 240 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-233ENST00000557529 VMP1Q96GC9 406 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 LPAR4Q99677 370 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 PRRX2Q99811 253 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 SEMA4CQ9C0C4 833 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 FAM192AQ9GZU8 254 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 REV1Q9UBZ9 1251 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 SLC7A7Q9UM01 511 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 PCDHGA6Q9Y5G7 932 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 PCDHGA1Q9Y5H4 931 aa11.51□□□□□ -0.57
SHMT2-233ENST00000557529 TRIM64CA6NLI5 447 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 SCDO00767 359 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 CNOT3O75175 753 aaKnown RBP11.5□□□□□ -0.57
SHMT2-233ENST00000557529 REM1O75628 298 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 UTS2O95399 124 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 ANGPTL1O95841 491 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 CSTAP01040 98 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 ZNF28P17035 718 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 ENDOUP21128 410 aaKnown RBP11.5□□□□□ -0.57
SHMT2-233ENST00000557529 TBXA2RP21731 343 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 MMP11P24347 488 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 CHMP24386 653 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 CRHBPP24387 322 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 IL12BP29460 328 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 NR0B1P51843 470 aaKnown RBP11.5□□□□□ -0.57
SHMT2-233ENST00000557529 CDC42P60953 191 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 INSM1Q01101 510 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-233ENST00000557529 TEKQ02763 1124 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 PLAURQ03405 335 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 PLCXD2Q0VAA5 305 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 PTGES3Q15185 160 aaKnown RBP11.5□□□□□ -0.57
SHMT2-233ENST00000557529 ISXQ2M1V0 245 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 CCDC157Q569K6 752 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 CDCP2Q5VXM1 449 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 LCN10Q6JVE6 187 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 PAPD4Q6PIY7 484 aaKnown RBP11.5□□□□□ -0.57
SHMT2-233ENST00000557529 HSDL2Q6YN16 418 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 MBOAT2Q6ZWT7 520 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 RNF113BQ8IZP6 322 aaKnown RBP11.5□□□□□ -0.57
SHMT2-233ENST00000557529 NFAM1Q8NET5 270 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-233ENST00000557529 OR4C3Q8NH37 302 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 OR8K3Q8NH51 312 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 FAM81AQ8TBF8 368 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 LIN37Q96GY3 246 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-233ENST00000557529 POLR1BQ9H9Y6 1135 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 IMPAD1Q9NX62 359 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 NDUFA13Q9P0J0 144 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 NTNG1Q9Y2I2 539 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 TPRKBQ9Y3C4 175 aa11.5□□□□□ -0.57
SHMT2-233ENST00000557529 LAMA1P25391 3075 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 IGHV3-20A0A0C4DH32 117 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 ZAR1LA6NP61 321 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 C4orf47A7E2U8 309 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 H3BN98 237 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 SLC1A7O00341 560 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 GDF9O60383 454 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 MPZL2O60487 215 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 FOXD2O60548 495 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-233ENST00000557529 ABCB7O75027 752 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 BCAS1O75363 584 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-233ENST00000557529 THY1P04216 161 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 TFAP2AP05549 437 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 NGFRP08138 427 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 CDK4P11802 303 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 EEF1B2P24534 225 aaKnown RBP11.49□□□□□ -0.57
SHMT2-233ENST00000557529 ACAA2P42765 397 aaKnown RBP11.49□□□□□ -0.57
SHMT2-233ENST00000557529 PNLIPRP2P54317 469 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 NRG3P56975 720 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 RNF4P78317 190 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 TSPAN31Q12999 210 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 EIF3IQ13347 325 aaKnown RBP11.49□□□□□ -0.57
SHMT2-233ENST00000557529 ZNF773Q6PK81 442 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 FAM198BQ6UWH4 519 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 ZNF517Q6ZMY9 492 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-233ENST00000557529 RAB11FIP2Q7L804 512 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 SLCO6A1Q86UG4 719 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 CCDC71Q8IV32 467 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-233ENST00000557529 NKAIN4Q8IVV8 208 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 ENTHD1Q8IYW4 607 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 LSMEM1Q8N8F7 131 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 OR5L2Q8NGL0 311 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 NUBPLQ8TB37 319 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 CNIH3Q8TBE1 160 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 MPP4Q96JB8 637 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 HS6ST2Q96MM7 605 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 TAAR9Q96RI9 348 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 LMF1Q96S06 567 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 DDA1Q9BW61 102 aa11.49□□□□□ -0.57
SHMT2-233ENST00000557529 EXOSC3Q9NQT5 275 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms