RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 TREX2Q9BQ50 279 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 LRRC61Q9BV99 259 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 ACTRT3Q9BYD9 372 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 TPSD1Q9BZJ3 242 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 AICDAQ9GZX7 198 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 CHRNA10Q9GZZ6 450 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 RAB33BQ9H082 229 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 GABARAPL1Q9H0R8 117 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 ING2Q9H160 280 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 TCEAL2Q9H3H9 227 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 MTHFD2LQ9H903 347 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 TBC1D17Q9HA65 648 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 ZNF556Q9HAH1 456 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 SMURF2Q9HAU4 748 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 CACYBPQ9HB71 228 aaKnown RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 ANKHQ9HCJ1 492 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 SLAMF7Q9NQ25 335 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 THSD1Q9NS62 852 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 SIRT3Q9NTG7 399 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 ZCCHC3Q9NUD5 404 aaKnown RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 TMEM74BQ9NUR3 256 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 EXD2Q9NVH0 621 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 DDX18Q9NVP1 670 aaKnown RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 C2orf42Q9NWW7 574 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 NDUFAF4Q9P032 175 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 PDP1Q9P0J1 537 aaPredicted RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 P2RX2Q9UBL9 471 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 TRPC4Q9UBN4 977 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 EPHA6Q9UF33 1036 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 ENOPH1Q9UHY7 261 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 KCNE5Q9UJ90 142 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 POMT2Q9UKY4 750 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 BLOC1S6Q9UL45 172 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 TMCC3Q9ULS5 477 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 DAPP1Q9UN19 280 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 PLCL2Q9UPR0 1127 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 SH3GLB1Q9Y371 365 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 SAMHD1Q9Y3Z3 626 aaKnown RBP4.15□□□□□ -1.75
SRP54-212ENST00000556992 CSNK1G3Q9Y6M4 447 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 ENPP4Q9Y6X5 453 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 U3KQV3 271 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 ALPK3Q96L96 1907 aa4.15□□□□□ -1.75
SRP54-212ENST00000556992 PRRC2BQ5JSZ5 2229 aaKnown RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 A0A087WV62 115 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 TRIM64A6NGJ6 449 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 SLC9B1P1A6NJY1 282 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 WASHC1A8K0Z3 465 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 B4DGG1 531 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 CLDN4O14493 209 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 BCAT2O15382 392 aaPredicted RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 ZZEF1O43149 2961 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 MRPS14O60783 128 aaKnown RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 CTNSO60931 367 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 DNAJB5O75953 348 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 STATHP02808 62 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 HMGN2P05204 90 aaKnown RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 TFAP2AP05549 437 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 PROS1P07225 676 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 GNAO1P09471 354 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 LINGO3P0C6S8 592 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 SLC35E2P0CK97 266 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 OR12D1P0DN82 309 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 CPMP14384 443 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 GNSP15586 552 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 POU3F2P20265 443 aaPredicted RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 CDH3P22223 829 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 GCSHP23434 173 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 IGFBP5P24593 272 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 IFNA8P32881 189 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 TTKP33981 857 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 GPR3P46089 330 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 XCR1P46094 333 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 KCNJ5P48544 419 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 ARRB1P49407 418 aaPredicted RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 CSNK1EP49674 416 aaKnown RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 DAPP51397 102 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 CRYBA2P53672 197 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 IST1P53990 364 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 CASP9P55211 416 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 SH3BGRP55822 239 aaPredicted RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 VSX2P58304 361 aaPredicted RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 VLDLRP98155 873 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 TNFRSF17Q02223 184 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 KEAP1Q14145 624 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 C14orf28Q4W4Y0 310 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 TCTE1Q5JU00 501 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 C6orf141Q5SZD1 244 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 RNF220Q5VTB9 566 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 GARNL3Q5VVW2 1013 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 KDM4DQ6B0I6 523 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 FRMPD2BQ6IN97 320 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 FAM180BQ6P0A1 224 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 TNFAIP8L2Q6P589 184 aaPredicted RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 FAM92BQ6ZTR7 304 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 TMEM179BQ7Z7N9 219 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 SLC44A2Q8IWA5 706 aaPredicted RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 OR2L13Q8N349 312 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 TTC29Q8NA56 475 aaPredicted RBP4.14□□□□□ -1.75
SRP54-212ENST00000556992 SUN3Q8TAQ9 357 aa4.14□□□□□ -1.75
SRP54-212ENST00000556992 ADAMTS16Q8TE57 1224 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms