RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 LRRC58Q96CX6 371 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 KLHDC3Q9BQ90 382 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 THUMPD3Q9BV44 507 aaKnown RBP15.9■□□□□ 0.14
SHMT2-225ENST00000556798 ACKR4Q9NPB9 350 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 A4GALTQ9NPC4 353 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 SPRR3Q9UBC9 169 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 SH3BGRL2Q9UJC5 107 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 CORO2BQ9UQ03 480 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 SLC6A5Q9Y345 797 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 GMEB1Q9Y692 573 aa15.9■□□□□ 0.14
SHMT2-225ENST00000556798 IGLV3-32A0A0A0MS00 114 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 TMEM247A6NEH6 219 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 SERINC4A6NH21 518 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 H3BNH8 94 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 AIM2O14862 343 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 HCRTR2O43614 444 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 SLC19A2O60779 497 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 GUSBP08236 651 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 GPX2P18283 190 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 DPP4P27487 766 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 SRD5A2P31213 254 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 PTGS2P35354 604 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 CRISP3P54108 245 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 CBLN3Q6UW01 205 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 MISPQ8IVT2 679 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 PCYOX1LQ8NBM8 494 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 NFKBIDQ8NI38 313 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 NEIL3Q8TAT5 605 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 ARSGQ96EG1 525 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 C1GALT1C1Q96EU7 318 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 TREX2Q9BQ50 279 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-225ENST00000556798 OR2B2Q9GZK3 357 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 THUMPD1Q9NXG2 353 aaKnown RBP15.89■□□□□ 0.13
SHMT2-225ENST00000556798 TAS2R10Q9NYW0 307 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 CARD8Q9Y2G2 431 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 RPH3AQ9Y2J0 694 aaPredicted RBP15.89■□□□□ 0.13
SHMT2-225ENST00000556798 L3MBTL1Q9Y468 752 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 MYO7BQ6PIF6 2116 aa15.89■□□□□ 0.13
SHMT2-225ENST00000556798 FLNCQ14315 2725 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 ARHGAP21Q5T5U3 1957 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 C15orf38-AP3S2A0A0A6YYH1 394 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 A0A1B0GVC2 190 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 CLDN24A6NM45 220 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 NPIPA2E9PIF3 369 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 NPIPA3F8WFD2 350 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 GTPBP1O00178 669 aaKnown RBP15.88■□□□□ 0.13
SHMT2-225ENST00000556798 AQP7O14520 342 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 HCN1O60741 890 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 BCAS1O75363 584 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-225ENST00000556798 DCTN3O75935 186 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 TPOP07202 933 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 ARAFP10398 606 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 HK1P19367 917 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 DSCR4P56555 118 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-225ENST00000556798 FGFBP1Q14512 234 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 CYP51A1Q16850 503 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 ZNF630Q2M218 657 aaPredicted RBP15.88■□□□□ 0.13
SHMT2-225ENST00000556798 RABL3Q5HYI8 236 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 C1QL3Q5VWW1 255 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 NANOGP8Q6NSW7 305 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 ARSKQ6UWY0 536 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 MTERF4Q7Z6M4 381 aaKnown RBP15.88■□□□□ 0.13
SHMT2-225ENST00000556798 TMCO5AQ8N6Q1 288 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 B4GALNT2Q8NHY0 566 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 LRRC37BQ96QE4 947 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 PTGES2Q9H7Z7 377 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 NANOGQ9H9S0 305 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 CALML5Q9NZT1 146 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 TINAGQ9UJW2 476 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 VDAC3Q9Y277 283 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 DSPPQ9NZW4 1301 aa15.88■□□□□ 0.13
SHMT2-225ENST00000556798 DIDO1Q9BTC0 2240 aaKnown RBP15.87■□□□□ 0.13
SHMT2-225ENST00000556798 TRGV8A0A0C4DH27 118 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 AGAP5A6NIR3 686 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 SHISA8B8ZZ34 492 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 C5orf58C9J3I9 102 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 SUSD5O60279 629 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 ZIC3O60481 467 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 CYP7B1O75881 506 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 UBTFL6P0CB48 400 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-225ENST00000556798 UBL4AP11441 157 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 RPS4Y1P22090 263 aaKnown RBP15.87■□□□□ 0.13
SHMT2-225ENST00000556798 CPA2P48052 419 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 CCR4P51679 360 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 CDK6Q00534 326 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 ADRM1Q16186 407 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 C3AR1Q16581 482 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 DCST1Q5T197 706 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 CD163Q86VB7 1156 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 IFNEQ86WN2 208 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 CCDC197Q8NCU1 140 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 OR5M1Q8NGP8 315 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 OR10A6Q8NH74 314 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 WDR60Q8WVS4 1066 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 PIF1Q9H611 641 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 KAT8Q9H7Z6 458 aaKnown RBP15.87■□□□□ 0.13
SHMT2-225ENST00000556798 MTHFD2LQ9H903 347 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-225ENST00000556798 GID8Q9NWU2 228 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 ZNF835Q9Y2P0 537 aa15.87■□□□□ 0.13
SHMT2-225ENST00000556798 PHF3Q92576 2039 aaKnown RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 239.4 ms