RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 ARSGQ96EG1 525 aa10.31□□□□□ -0.76
FOXN3-212ENST00000556541 DUS3LQ96G46 650 aaKnown RBP10.31□□□□□ -0.76
FOXN3-212ENST00000556541 CLPTM1LQ96KA5 538 aa10.31□□□□□ -0.76
FOXN3-212ENST00000556541 DOHHQ9BU89 302 aa10.31□□□□□ -0.76
FOXN3-212ENST00000556541 TBL1XR1Q9BZK7 514 aa10.31□□□□□ -0.76
FOXN3-212ENST00000556541 POLR2J2Q9GZM3 115 aaKnown RBP10.31□□□□□ -0.76
FOXN3-212ENST00000556541 LAT2Q9GZY6 243 aa10.31□□□□□ -0.76
FOXN3-212ENST00000556541 POLR2J3Q9H1A7 115 aaKnown RBP10.31□□□□□ -0.76
FOXN3-212ENST00000556541 PIF1Q9H611 641 aa10.31□□□□□ -0.76
FOXN3-212ENST00000556541 MAGIXQ9H6Y5 334 aa10.31□□□□□ -0.76
FOXN3-212ENST00000556541 PROK2Q9HC23 129 aa10.31□□□□□ -0.76
FOXN3-212ENST00000556541 ZNF443Q9Y2A4 671 aaPredicted RBP10.31□□□□□ -0.76
FOXN3-212ENST00000556541 MRPS18CQ9Y3D5 142 aaKnown RBP10.31□□□□□ -0.76
FOXN3-212ENST00000556541 WIF1Q9Y5W5 379 aa10.31□□□□□ -0.76
FOXN3-212ENST00000556541 HEATR5AQ86XA9 2040 aa10.31□□□□□ -0.76
FOXN3-212ENST00000556541 TMEM229AB2RXF0 380 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 KLRC4-KLRK1H3BQV0 150 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 ETV2O00321 342 aaPredicted RBP10.3□□□□□ -0.76
FOXN3-212ENST00000556541 SNPHO15079 494 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 NDUFB5O43674 189 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 FMO6PO60774 539 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 CIB2O75838 187 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 SP1P08047 785 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 CCL3P10147 92 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 SLC6A8P48029 635 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 MS4A2Q01362 244 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 OC90Q02509 493 aaPredicted RBP10.3□□□□□ -0.76
FOXN3-212ENST00000556541 DMTNQ08495 405 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 FLOT2Q14254 428 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 GANABQ14697 944 aaKnown RBP10.3□□□□□ -0.76
FOXN3-212ENST00000556541 NRF1Q16656 503 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 CYBRD1Q53TN4 286 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 ZNF311Q5JNZ3 666 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 APOOLQ6UXV4 268 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 ZNF550Q7Z398 422 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 FADS6Q8N9I5 356 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 LSM14AQ8ND56 463 aaKnown RBP10.3□□□□□ -0.76
FOXN3-212ENST00000556541 FAM156AQ8NDB6 213 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 C9orf43Q8TAL5 461 aaPredicted RBP10.3□□□□□ -0.76
FOXN3-212ENST00000556541 FIG4Q92562 907 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 EXTL1Q92935 676 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 FAM162AQ96A26 154 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 ZG16BQ96DA0 208 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 ABHD17AQ96GS6 310 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 C5orf34Q96MH7 638 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 SIGLEC12Q96PQ1 595 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 FAM173AQ9BQD7 235 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 PCDHAC1Q9H158 963 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 METTL7AQ9H8H3 244 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 QPCTLQ9NXS2 382 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 KLHL28Q9NXS3 571 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 GMPR2Q9P2T1 348 aaKnown RBP10.3□□□□□ -0.76
FOXN3-212ENST00000556541 EGFL7Q9UHF1 273 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 CHST2Q9Y4C5 530 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 CELSR3Q9NYQ7 3312 aa10.3□□□□□ -0.76
FOXN3-212ENST00000556541 LOC400499M0QZD8 3231 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 CENPVL1A0A0U1RR11 272 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 TCRBV5S2A0A599 114 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 TCRBV3S1A0A5B6 114 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 ZNF264O43296 627 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 SUV39H1O43463 412 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 ANGPTL1O95841 491 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 CSTAP01040 98 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 SEMG1P04279 462 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 GPIP06744 558 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 FESP07332 822 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 UBL4AP11441 157 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 TCN1P20061 433 aaPredicted RBP10.29□□□□□ -0.76
FOXN3-212ENST00000556541 ATP6V1B2P21281 511 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 RFX3P48380 749 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 P2RX1P51575 399 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 KCNJ2P63252 427 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 KCNC4Q03721 635 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 FOXO1Q12778 655 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 SKP2Q13309 424 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 DUSP7Q16829 419 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 GLYR1Q49A26 553 aaPredicted RBP10.29□□□□□ -0.76
FOXN3-212ENST00000556541 ZNF766Q5HY98 468 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 MRPL2Q5T653 305 aaKnown RBP10.29□□□□□ -0.76
FOXN3-212ENST00000556541 ZNF836Q6ZNA1 936 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 MDGA2Q7Z553 956 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 PACS2Q86VP3 889 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 ZFP62Q8NB50 900 aaPredicted RBP10.29□□□□□ -0.76
FOXN3-212ENST00000556541 FAM98AQ8NCA5 519 aaKnown RBP10.29□□□□□ -0.76
FOXN3-212ENST00000556541 GPR32P1Q8NGA4 272 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 SLC26A7Q8TE54 656 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 GEMIN6Q8WXD5 167 aaKnown RBP10.29□□□□□ -0.76
FOXN3-212ENST00000556541 NR4A3Q92570 626 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 CCDC124Q96CT7 223 aaKnown RBP10.29□□□□□ -0.76
FOXN3-212ENST00000556541 ZNF597Q96LX8 424 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 LRGUKQ96M69 825 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 ARHGDIGQ99819 225 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 DNAJB12Q9NXW2 375 aaKnown RBP10.29□□□□□ -0.76
FOXN3-212ENST00000556541 KLRF1Q9NZS2 232 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 FLRT3Q9NZU0 649 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 PACSIN3Q9UKS6 424 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 ICAM5Q9UMF0 924 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 BOKQ9UMX3 212 aaPredicted RBP10.29□□□□□ -0.76
FOXN3-212ENST00000556541 SLC9A8Q9Y2E8 581 aa10.29□□□□□ -0.76
FOXN3-212ENST00000556541 A0A087WZY1 265 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms