RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 KHKP50053 298 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 ATP12AP54707 1039 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 GYS2P54840 703 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 GFRA1P56159 465 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 DSCR4P56555 118 aaPredicted RBP8.76□□□□□ -1.01
SRP54-210ENST00000556380 CRYZQ08257 329 aaKnown RBP8.76□□□□□ -1.01
SRP54-210ENST00000556380 C17orf67Q0P5P2 114 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 SF3A3Q12874 501 aaKnown RBP eCLIP8.76□□□□□ -1.012e-10■■■■□ 21
SRP54-210ENST00000556380 CD226Q15762 336 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 ZNF141Q15928 474 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 MAPK14Q16539 360 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 TMEM44Q2T9K0 475 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 VASNQ6EMK4 673 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 RTL6Q6ICC9 239 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 TYW3Q6IPR3 259 aaKnown RBP8.76□□□□□ -1.01
SRP54-210ENST00000556380 DNAJC14Q6Y2X3 702 aaPredicted RBP8.76□□□□□ -1.01
SRP54-210ENST00000556380 FJX1Q86VR8 437 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 DPP10Q8N608 796 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 TSPEARQ8WU66 669 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 C10orf82Q8WW14 230 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 ROPN1LQ96C74 230 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 ZG16BQ96DA0 208 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 CHMP6Q96FZ7 201 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 AURKBQ96GD4 344 aaPredicted RBP8.76□□□□□ -1.01
SRP54-210ENST00000556380 PSMG3-AS1Q96PY0 264 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 DMRTA2Q96SC8 542 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 TIMP4Q99727 224 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 KLHDC3Q9BQ90 382 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 TBL1XR1Q9BZK7 514 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 LDAHQ9H6V9 325 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 RUBCNLQ9H714 662 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 TPT1P8Q9HAU6 139 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 SAR1AQ9NR31 198 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 POLE3Q9NRF9 147 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 PNPLA3Q9NST1 481 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 MRGBPQ9NV56 204 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 EXD2Q9NVH0 621 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 FAM53CQ9NYF3 392 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 MED11Q9P086 117 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 PPP4R1LQ9P1A2 415 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 KLHL14Q9P2G3 628 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 TNFRSF10DQ9UBN6 386 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 MEMO1Q9Y316 297 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 SLC6A5Q9Y345 797 aa8.76□□□□□ -1.01
SRP54-210ENST00000556380 PCNX3Q9H6A9 2034 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 E9PLN8 166 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 NR5A2O00482 541 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 CCL21O00585 134 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 PRRG2O14669 202 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 BCKDKO14874 412 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 OIP5O43482 229 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 NDUFB5O43674 189 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 KIAA0513O60268 411 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 UGT2B17O75795 530 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 AGFG2O95081 481 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 TFPTP0C1Z6 253 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 BMP7P18075 431 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 ATP6V1C1P21283 382 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 DRD4P21917 467 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 DPP4P27487 766 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 CLK3P49761 638 aaKnown RBP8.75□□□□□ -1.01
SRP54-210ENST00000556380 SEC24CP53992 1094 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 ADORA2A-AS1P86434 159 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 CHRNEQ04844 493 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 STX5Q13190 355 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 SYPL1Q16563 259 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 GLYR1Q49A26 553 aaPredicted RBP8.75□□□□□ -1.01
SRP54-210ENST00000556380 FLYWCH1Q4VC44 716 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 WIPI1Q5MNZ9 446 aaPredicted RBP8.75□□□□□ -1.01
SRP54-210ENST00000556380 C6orf10Q5SRN2 563 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 DCST1Q5T197 706 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 FRRS1Q6ZNA5 592 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 CD163Q86VB7 1156 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 MISPQ8IVT2 679 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 MARVELD2Q8N4S9 558 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 ANKFN1Q8N957 763 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 OR4K17Q8NGC6 315 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 OR5M9Q8NGP3 310 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 PNPT1Q8TCS8 783 aaKnown RBP8.75□□□□□ -1.01
SRP54-210ENST00000556380 SSC4DQ8WTU2 575 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 SARAFQ96BY9 339 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 ZNF524Q96C55 264 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 C1GALT1C1Q96EU7 318 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 CCDC120Q96HB5 630 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 TRNT1Q96Q11 434 aaKnown RBP8.75□□□□□ -1.01
SRP54-210ENST00000556380 VKORC1Q9BQB6 163 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 UGT2B28Q9BY64 529 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 PRDM14Q9GZV8 571 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 SLC38A1Q9H2H9 487 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 TAS2R10Q9NYW0 307 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 VAPAQ9P0L0 249 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 MKLN1Q9UL63 735 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 LIPT1Q9Y234 373 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 DTNAQ9Y4J8 743 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 NBPF19A0A087WUL8 3843 aa8.75□□□□□ -1.01
SRP54-210ENST00000556380 SERINC4A6NH21 518 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 CLIC1O00299 241 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 FBP2O00757 339 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 SCDO00767 359 aa8.74□□□□□ -1.01
SRP54-210ENST00000556380 DNAJA2O60884 412 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms