RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 PPIHO43447 177 aaKnown RBP1.22□□□□□ -2.21
SRP54-207ENST00000555535 BUB1O43683 1085 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 CSF2P04141 144 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 PCCBP05166 539 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 PRDX3P30048 256 aaKnown RBP1.22□□□□□ -2.21
SRP54-207ENST00000555535 RPL4P36578 427 aaKnown RBP1.22□□□□□ -2.21
SRP54-207ENST00000555535 PRPS1P60891 318 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 RND3P61587 244 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 IL9RQ01113 521 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 MEF2BQ02080 365 aaPredicted RBP1.22□□□□□ -2.21
SRP54-207ENST00000555535 KARSQ15046 597 aaKnown RBP1.22□□□□□ -2.21
SRP54-207ENST00000555535 UBE2V2Q15819 145 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 CCDC57Q2TAC2 916 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 TMEM52BQ4KMG9 183 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 ABCA11PQ4W5N1 156 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 BEND6Q5SZJ8 279 aaPredicted RBP1.22□□□□□ -2.21
SRP54-207ENST00000555535 SLX4IPQ5VYV7 408 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 LEG1Q6P5S2 330 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 UNQ9370/PRO34162Q6UXP9 181 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 BRD3OSQ6XYD6 125 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 COX15Q7KZN9 410 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 VSIG1Q86XK7 387 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 TTC5Q8N0Z6 440 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 DNAJA4Q8WW22 397 aaPredicted RBP1.22□□□□□ -2.21
SRP54-207ENST00000555535 OSBPL8Q9BZF1 889 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 FAM124BQ9H5Z6 455 aaPredicted RBP1.22□□□□□ -2.21
SRP54-207ENST00000555535 GRPEL1Q9HAV7 217 aa1.22□□□□□ -2.21
SRP54-207ENST00000555535 ZCCHC17Q9NP64 241 aaKnown RBP1.22□□□□□ -2.21
SRP54-207ENST00000555535 COL27A1Q8IZC6 1860 aaPredicted RBP1.21□□□□□ -2.22
SRP54-207ENST00000555535 C5orf51A6NDU8 294 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 ZNF705EA8MWA4 302 aaPredicted RBP1.21□□□□□ -2.22
SRP54-207ENST00000555535 OR10H3O60404 316 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 TBCAO75347 108 aaKnown RBP1.21□□□□□ -2.22
SRP54-207ENST00000555535 GLULP15104 373 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 ADSSP30520 456 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 HOXA9P31269 272 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 PITPNBP48739 271 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 CRISP3P54108 245 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 SNU13P55769 128 aaKnown RBP1.21□□□□□ -2.22
SRP54-207ENST00000555535 RPL8P62917 257 aaKnown RBP1.21□□□□□ -2.22
SRP54-207ENST00000555535 RBP5P82980 135 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 FUT7Q11130 342 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 ZP4Q12836 540 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 CDKN3Q16667 212 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 CCDC184Q52MB2 194 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 CYBRD1Q53TN4 286 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 CASC10Q5T4H9 136 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 BTNL3Q6UXE8 466 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 UNC5DQ6UXZ4 953 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 KCTD9Q7L273 389 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 ARMCX2Q7L311 632 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 GPBP1Q86WP2 473 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 C6orf223Q8N319 242 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 UBALD1Q8TB05 177 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 RMI2Q96E14 147 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 ZMAT2Q96NC0 199 aaKnown RBP1.21□□□□□ -2.22
SRP54-207ENST00000555535 RASL11BQ9BPW5 248 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 MAGT1Q9H0U3 335 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 MTRF1LQ9UGC7 380 aaKnown RBP1.21□□□□□ -2.22
SRP54-207ENST00000555535 DCDC2Q9UHG0 476 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 MAB21L2Q9Y586 359 aa1.21□□□□□ -2.22
SRP54-207ENST00000555535 PPIAL4EA0A075B759 164 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 PPIAL4CA0A0B4J2A2 164 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 FBLL1A6NHQ2 334 aaKnown RBP1.2□□□□□ -2.22
SRP54-207ENST00000555535 PPIAL4DF5H284 164 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 GFYI3L273 518 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 SYNGR4O95473 234 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 MOSP00540 346 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 PPIAL4FP0DN26 164 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 CCL11P51671 97 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 CSNK1G2P78368 415 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 ACSF3Q4G176 576 aaPredicted RBP1.2□□□□□ -2.22
SRP54-207ENST00000555535 PRR9Q5T870 116 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 B3GLCTQ6Y288 498 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 LINC00696Q6ZRV3 163 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 GALNTL5Q7Z4T8 443 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 SYCP3Q8IZU3 236 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 CYB561D1Q8N8Q1 229 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 COLGALT1Q8NBJ5 622 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 OR2T33Q8NG76 320 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 GOT1L1Q8NHS2 421 aaPredicted RBP1.2□□□□□ -2.22
SRP54-207ENST00000555535 GIMAP1Q8WWP7 306 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 CFAP36Q96G28 342 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 SPATA17Q96L03 361 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 SRXN1Q9BYN0 137 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 LHX9Q9NQ69 397 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 PIGVQ9NUD9 493 aa1.2□□□□□ -2.22
SRP54-207ENST00000555535 PAK1IP1Q9NWT1 392 aaPredicted RBP1.2□□□□□ -2.22
SRP54-207ENST00000555535 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.2□□□□□ -2.22
SRP54-207ENST00000555535 SMIM30A4D0T7 59 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 TIMM44O43615 452 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 ZNF780AO75290 641 aaPredicted RBP1.19□□□□□ -2.22
SRP54-207ENST00000555535 SPAG7O75391 227 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 CENPBP07199 599 aaPredicted RBP1.19□□□□□ -2.22
SRP54-207ENST00000555535 THRBP10828 461 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 FERP16591 822 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 COX7A1P24310 79 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 TMOD1P28289 359 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 C17orf67Q0P5P2 114 aa1.19□□□□□ -2.22
SRP54-207ENST00000555535 BFSP1Q12934 665 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms