RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 INPP5KQ9BT40 448 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 CHST11Q9NPF2 352 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 RNF6Q9Y252 685 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 VDAC3Q9Y277 283 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 FAM215AQ9Y5M1 114 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 HRH3Q9Y5N1 445 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 KCNE3Q9Y6H6 103 aa10.98□□□□□ -0.65
SRP54-206ENST00000555317 PCNX3Q9H6A9 2034 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 IGLV3-32A0A0A0MS00 114 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 NPIPA5A0A0B4J1W7 369 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 TMEM247A6NEH6 219 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 FAM90A27PA6NNH2 459 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 NPIPA7E9PJI5 369 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 NR5A2O00482 541 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 ATP8B1O43520 1251 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 ZIC3O60481 467 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 IL2RAP01589 272 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 VIMP08670 466 aaKnown RBP10.97□□□□□ -0.65
SRP54-206ENST00000555317 NPIPA8P0DM63 369 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 CDKN2CP42773 168 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 ZFP36L2P47974 494 aaKnown RBP10.97□□□□□ -0.65
SRP54-206ENST00000555317 MRPL19P49406 292 aaKnown RBP10.97□□□□□ -0.65
SRP54-206ENST00000555317 ATP4BP51164 291 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 CCR4P51679 360 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 GFRA1P56159 465 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 EEFSECP57772 596 aaKnown RBP10.97□□□□□ -0.65
SRP54-206ENST00000555317 GLYR1Q49A26 553 aaPredicted RBP10.97□□□□□ -0.65
SRP54-206ENST00000555317 DCST1Q5T197 706 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 RTL6Q6ICC9 239 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 MEIOBQ8N635 442 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 PNPT1Q8TCS8 783 aaKnown RBP10.97□□□□□ -0.65
SRP54-206ENST00000555317 RAB8BQ92930 207 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 VPS33AQ96AX1 596 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 WDYHV1Q96HA8 205 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 SDF2Q99470 211 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 RTN4RQ9BZR6 473 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 NMUR2Q9GZQ4 415 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 RAD21L1Q9H4I0 556 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 SERHL2Q9H4I8 314 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 RUBCNLQ9H714 662 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 CACYBPQ9HB71 228 aaKnown RBP10.97□□□□□ -0.65
SRP54-206ENST00000555317 POLE3Q9NRF9 147 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 CCDC167Q9P0B6 97 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 LIPT1Q9Y234 373 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 WDR45Q9Y484 360 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 DTNAQ9Y4J8 743 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 ADGRG4Q8IZF6 3080 aa10.97□□□□□ -0.65
SRP54-206ENST00000555317 DOCK7Q96N67 2140 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 NBPF19A0A087WUL8 3843 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 HSPB2A8KAH6 182 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 H3BML4 177 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 EPPINO95925 133 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 UBL4AP11441 157 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 PEPDP12955 493 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 CPN1P15169 458 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 ZNF17P17021 662 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 ME2P23368 584 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 CRATP43155 626 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 MAGEA8P43361 318 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 STARP49675 285 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 RNF144AP50876 292 aaPredicted RBP10.96□□□□□ -0.65
SRP54-206ENST00000555317 HSPB2Q16082 182 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 AGKQ53H12 422 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 KLHL26Q53HC5 615 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 PDZK1Q5T2W1 519 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 RIPPLY2Q5TAB7 128 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 NSUN5P2Q63ZY6 315 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 ARSKQ6UWY0 536 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 CCDC71Q8IV32 467 aaPredicted RBP10.96□□□□□ -0.65
SRP54-206ENST00000555317 UBQLNLQ8IYU4 475 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 OR5M1Q8NGP8 315 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 RFWD2Q8NHY2 731 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 ZPLD1Q8TCW7 415 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 STON2Q8WXE9 905 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 SMPDL3BQ92485 455 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 ZBTB8AQ96BR9 441 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 ROPN1LQ96C74 230 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 SPDL1Q96EA4 605 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 ZNF350Q9GZX5 532 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 CALHM2Q9HA72 323 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 KCNJ16Q9NPI9 418 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 TMEM45AQ9NWC5 275 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 MKLN1Q9UL63 735 aa10.96□□□□□ -0.65
SRP54-206ENST00000555317 ITPR2Q14571 2701 aa10.96□□□□□ -0.66
SRP54-206ENST00000555317 ABCA12Q86UK0 2595 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 OR2M5A3KFT3 312 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 SERINC4A6NH21 518 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 CD8B2A6NJW9 211 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 HMGN4O00479 90 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 DVL2O14641 736 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 ZNF264O43296 627 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 SEC14L5O43304 696 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 KIAA0513O60268 411 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 TNFRSF21O75509 655 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 CYP7B1O75881 506 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 ZCCHC18P0CG32 403 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 NR2F1P10589 423 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 COX6B1P14854 86 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 ZNF708P17019 499 aa10.95□□□□□ -0.66
SRP54-206ENST00000555317 COL8A1P27658 744 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms