RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 PTCHD4Q6ZW05 846 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 MMP21Q8N119 569 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 IL22RA1Q8N6P7 574 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 BBS10Q8TAM1 723 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 SLC35C2Q9NQQ7 365 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 MS4A12Q9NXJ0 267 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 CCDC59Q9P031 241 aaKnown RBP16.12■□□□□ 0.17
SHOX-204ENST00000554971 HCN3Q9P1Z3 774 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 IL17BQ9UHF5 180 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 GPC6Q9Y625 555 aaPredicted RBP16.12■□□□□ 0.17
SHOX-204ENST00000554971 PMF1-BGLAPU3KQ54 211 aa16.12■□□□□ 0.17
SHOX-204ENST00000554971 SAGE2PA6NJ88 616 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 FFAR1O14842 300 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 KLF7O75840 302 aaPredicted RBP16.11■□□□□ 0.17
SHOX-204ENST00000554971 WT1P19544 449 aaPredicted RBP16.11■□□□□ 0.17
SHOX-204ENST00000554971 NTSP30990 170 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 SLC15A1P46059 708 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 BCAP31P51572 246 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 PPP5CP53041 499 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 FOXK2Q01167 660 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 ZNF404Q494X3 552 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 ARHGAP40Q5TG30 622 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 SLX4IPQ5VYV7 408 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 LACC1Q8IV20 430 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 GPR32P1Q8NGA4 272 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 KCNE4Q8WWG9 221 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 EXOSC8Q96B26 276 aaKnown RBP16.11■□□□□ 0.17
SHOX-204ENST00000554971 BTBD2Q9BX70 525 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 NXF2Q9GZY0 626 aaKnown RBP16.11■□□□□ 0.17
SHOX-204ENST00000554971 SEC14L3Q9UDX4 400 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.11■□□□□ 0.17
SHOX-204ENST00000554971 MRPS18BQ9Y676 258 aaKnown RBP16.11■□□□□ 0.17
SHOX-204ENST00000554971 PCSK5Q92824 1860 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 IGLV3-12A0A075B6K2 115 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 A0A1W2PRQ8 180 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 ISPDA4D126 451 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 STSP08842 583 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 ADORA3P0DMS8 318 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 ATP5A1P25705 553 aaKnown RBP16.11■□□□□ 0.17
SHOX-204ENST00000554971 SSR2P43308 183 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 AVPR1BP47901 424 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 RGS6P49758 472 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 KHKP50053 298 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 LIM2P55344 173 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 RPS18P62269 152 aaKnown RBP16.11■□□□□ 0.17
SHOX-204ENST00000554971 LSM3P62310 102 aaKnown RBP16.11■□□□□ 0.17
SHOX-204ENST00000554971 HSPB3Q12988 150 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 RUNX2Q13950 521 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 GANABQ14697 944 aaKnown RBP16.11■□□□□ 0.17
SHOX-204ENST00000554971 NCF4Q15080 339 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 VWA2Q5GFL6 755 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 PLAG1Q6DJT9 500 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 C19orf48Q6RUI8 117 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 OVCH1Q7RTY7 1134 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 B3GNT7Q8NFL0 401 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 MCFD2Q8NI22 146 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 ZCCHC14Q8WYQ9 949 aaKnown RBP16.11■□□□□ 0.17
SHOX-204ENST00000554971 GTPBP3Q969Y2 492 aaKnown RBP16.11■□□□□ 0.17
SHOX-204ENST00000554971 COL26A1Q96A83 441 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 ITPKCQ96DU7 683 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 SLC35G5Q96KT7 338 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 AMDHD1Q96NU7 426 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 SPSB2Q99619 263 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 SLC26A1Q9H2B4 701 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 DSN1Q9H410 356 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 SIAEQ9HAT2 523 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 GPR83Q9NYM4 423 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 REV1Q9UBZ9 1251 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 UGT2A1Q9Y4X1 527 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 KALRNO60229 2985 aa16.11■□□□□ 0.17
SHOX-204ENST00000554971 EFSO43281 561 aa16.1■□□□□ 0.17
SHOX-204ENST00000554971 SLC28A2O43868 658 aa16.1■□□□□ 0.17
SHOX-204ENST00000554971 LIFP15018 202 aa16.1■□□□□ 0.17
SHOX-204ENST00000554971 FBLP22087 321 aaKnown RBP16.1■□□□□ 0.17
SHOX-204ENST00000554971 HIST1H1TP22492 207 aaPredicted RBP16.1■□□□□ 0.17
SHOX-204ENST00000554971 ELAVL4P26378 380 aaKnown RBP16.1■□□□□ 0.17
SHOX-204ENST00000554971 DLSTP36957 453 aa16.1■□□□□ 0.17
SHOX-204ENST00000554971 CRISP3P54108 245 aa16.1■□□□□ 0.17
SHOX-204ENST00000554971 UGT2B15P54855 530 aa16.1■□□□□ 0.17
SHOX-204ENST00000554971 MAPK11Q15759 364 aa16.1■□□□□ 0.17
SHOX-204ENST00000554971 SLC25A30Q5SVS4 291 aa16.1■□□□□ 0.17
SHOX-204ENST00000554971 NDUFAF5Q5TEU4 345 aa16.1■□□□□ 0.17
SHOX-204ENST00000554971 ACOT4Q8N9L9 421 aa16.1■□□□□ 0.17
SHOX-204ENST00000554971 TREX2Q9BQ50 279 aaPredicted RBP16.1■□□□□ 0.17
SHOX-204ENST00000554971 FUZQ9BT04 418 aa16.1■□□□□ 0.17
SHOX-204ENST00000554971 SLC25A19Q9HC21 320 aa16.1■□□□□ 0.17
SHOX-204ENST00000554971 TRPC4Q9UBN4 977 aa16.1■□□□□ 0.17
SHOX-204ENST00000554971 MKLN1Q9UL63 735 aa16.1■□□□□ 0.17
SHOX-204ENST00000554971 SLC9A8Q9Y2E8 581 aa16.1■□□□□ 0.17
SHOX-204ENST00000554971 VSTM2BA6NLU5 285 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 KLK10O43240 276 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 BMP4P12644 408 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 CD97P48960 835 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 RHAGQ02094 409 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 DNASE1L3Q13609 305 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 ATP1A4Q13733 1029 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 ARMCX4Q5H9R4 360 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 MRM1Q6IN84 353 aaKnown RBP16.09■□□□□ 0.17
SHOX-204ENST00000554971 GDPGP1Q6ZNW5 385 aa16.09■□□□□ 0.17
SHOX-204ENST00000554971 LAPTM4BQ86VI4 370 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms