RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 USP6P35125 1406 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 RALGAPA1Q6GYQ0 2036 aa2.39□□□□□ -2.03
SCFD1-213ENST00000554776 A0A087WWV3 80 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 METTL21EPA6NDL7 271 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 OR6C65A6NJZ3 312 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 A8MX80 341 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 H3BMQ9 156 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 RIPK2O43353 540 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 OPN1LWP04000 364 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 HBQ1P09105 142 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 ALOX5P09917 674 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 H2AFXP16104 143 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-213ENST00000554776 GLRA2P23416 452 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 MAGEA9P43362 315 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 GBX2P52951 348 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-213ENST00000554776 ACTR1AP61163 376 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 CBX1P83916 185 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 BDH1Q02338 343 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 MXD4Q14582 209 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-213ENST00000554776 SYPL1Q16563 259 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 CYP51A1Q16850 503 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 TIMM50Q3ZCQ8 353 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 OR8G2PQ6IF36 304 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 PMF1Q6P1K2 205 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 TMEM123Q8N131 208 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 CSNK1A1LQ8N752 337 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-213ENST00000554776 Q8N9G6 341 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-213ENST00000554776 STXBP6Q8NFX7 210 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 OR5L2Q8NGL0 311 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 OR9A4Q8NGU2 314 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 VN1R17PQ8TDU5 208 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 SPRYD4Q8WW59 207 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-213ENST00000554776 ARNTL2Q8WYA1 636 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 MYLPFQ96A32 169 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 SENP8Q96LD8 212 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 NOL4LQ96MY1 436 aaPredicted RBP2.38□□□□□ -2.03
SCFD1-213ENST00000554776 RIT2Q99578 217 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 GON7Q9BXV9 100 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 POLR1EQ9GZS1 481 aaKnown RBP2.38□□□□□ -2.03
SCFD1-213ENST00000554776 VCX2Q9H322 139 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 IMPAD1Q9NX62 359 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 CLEC5AQ9NY25 188 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 ZNF581Q9P0T4 197 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 CRLS1Q9UJA2 301 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 CLEC4AQ9UMR7 237 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 USP16Q9Y5T5 823 aa2.38□□□□□ -2.03
SCFD1-213ENST00000554776 E9PLD3 99 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 PRRG1O14668 218 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 MAGEB3O15480 346 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 LATO43561 262 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 GPRIN2O60269 458 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 GJB5O95377 273 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 CT45A10P0DMU9 189 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 PGAM2P15259 253 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 TPSB2P20231 275 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 IGFBP5P24593 272 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 RDXP35241 583 aaKnown RBP2.37□□□□□ -2.03
SCFD1-213ENST00000554776 CXCL6P80162 114 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 OTUD4Q01804 1114 aaKnown RBP2.37□□□□□ -2.03
SCFD1-213ENST00000554776 CHIT1Q13231 466 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 SERTAD2Q14140 314 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 DPYSL3Q14195 570 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 KCNJ11Q14654 390 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 TPSAB1Q15661 275 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 SLC5A12Q1EHB4 618 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 HIGD2BQ4VC39 106 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 TEX44Q53QW1 395 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 TTC23Q5W5X9 447 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 KDELC1Q6UW63 502 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 GCNT7Q6ZNI0 430 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 SH2D6Q7Z4S9 175 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 IFNEQ86WN2 208 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 CLEC4FQ8N1N0 589 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 SLC39A11Q8N1S5 342 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 LINC00612Q8N6U2 182 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 FAM133AQ8N9E0 248 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 OR51G2Q8NGK0 314 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 RHOXF1Q8NHV9 184 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 CCDC26Q8TAB7 109 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 TYMSOSQ8TAI1 123 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 AGAP11Q8TF27 550 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 GTSF1Q8WW33 167 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 FAM3CQ92520 227 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 C12orf66Q96MD2 445 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 AMDHD1Q96NU7 426 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 PSMB7Q99436 277 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 SLC6A7Q99884 636 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 APOL2Q9BQE5 337 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 NXF5Q9H1B4 397 aaKnown RBP2.37□□□□□ -2.03
SCFD1-213ENST00000554776 EXOSC3Q9NQT5 275 aaKnown RBP2.37□□□□□ -2.03
SCFD1-213ENST00000554776 PNO1Q9NRX1 252 aaKnown RBP2.37□□□□□ -2.03
SCFD1-213ENST00000554776 PRR34Q9NV39 138 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 RNF14Q9UBS8 474 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 CYTH4Q9UIA0 394 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 MEMO1Q9Y316 297 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 PPIAL4AQ9Y536 164 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 SPACA6W5XKT8 324 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 KIF16BQ96L93 1317 aa2.37□□□□□ -2.03
SCFD1-213ENST00000554776 CFAP65Q6ZU64 1925 aaKnown RBP2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms