RNA–Protein interactions for RNA: ENST00000554672.5

ATXN3-229, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 759 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-229ENST00000554672 IRF8Q02556 426 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 PLCXD2Q0VAA5 305 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 SLMAPQ14BN4 828 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 PON3Q15166 354 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 TRIP13Q15645 432 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-229ENST00000554672 SGCBQ16585 318 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 PDK4Q16654 411 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 C21orf62-AS1Q17RA5 79 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 C18orf21Q32NC0 220 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-229ENST00000554672 ZNF672Q499Z4 452 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-229ENST00000554672 CDKL4Q5MAI5 379 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 FAM120AOSQ5T036 256 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 NCMAPQ5T1S8 102 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 AGAP6Q5VW22 663 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 KHDRBS2Q5VWX1 349 aaKnown RBP4.29□□□□□ -1.72
ATXN3-229ENST00000554672 ANKRD22Q5VYY1 191 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 C18orf63Q68DL7 685 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 FAM166AQ6J272 317 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 FAM45BPQ6NSW5 357 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 MED27Q6P2C8 311 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 FRA10AC1Q70Z53 315 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 ADAMTSL2Q86TH1 951 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 DTX2Q86UW9 622 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 CNTN4Q8IWV2 1026 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 LAS2Q8IYD9 372 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 UBQLNLQ8IYU4 475 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 RNF10Q8N5U6 811 aaKnown RBP4.29□□□□□ -1.72
ATXN3-229ENST00000554672 GBP7Q8N8V2 638 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-229ENST00000554672 SNX31Q8N9S9 440 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 FNDC9Q8TBE3 224 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 FAM45AQ8TCE6 357 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 MAIP1Q8WWC4 291 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 HSD17B8Q92506 261 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 OMA1Q96E52 524 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 SORBS1Q9BX66 1292 aaKnown RBP4.29□□□□□ -1.72
ATXN3-229ENST00000554672 PINK1Q9BXM7 581 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 STMN4Q9H169 189 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-229ENST00000554672 NXF5Q9H1B4 397 aaKnown RBP4.29□□□□□ -1.72
ATXN3-229ENST00000554672 OR51B5Q9H339 312 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 WDR41Q9HAD4 459 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 LYARQ9NX58 379 aaKnown RBP4.29□□□□□ -1.72
ATXN3-229ENST00000554672 CISD1Q9NZ45 108 aaKnown RBP4.29□□□□□ -1.72
ATXN3-229ENST00000554672 CTNNAL1Q9UBT7 734 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 DKKL1Q9UK85 242 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 FBXL2Q9UKC9 423 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 ASB4Q9Y574 426 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 ZANQ9Y493 2812 aa4.29□□□□□ -1.72
ATXN3-229ENST00000554672 KIAA1549Q9HCM3 1950 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 SERINC4A6NH21 518 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 OR6C70A6NIJ9 312 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 GLOD5A6NK44 160 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 EFCAB8A8MWE9 144 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 H0YC42 278 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 TO15178 435 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 PRKRAO75569 313 aaKnown RBP4.28□□□□□ -1.72
ATXN3-229ENST00000554672 REM1O75628 298 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 AQP8O94778 261 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 LY86O95711 162 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 PLGP00747 810 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-229ENST00000554672 KRT14P02533 472 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 CT62P0C5K7 136 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 FAM58BPP0C7Q3 252 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 PCNAP12004 261 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 ZNF37AP17032 561 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-229ENST00000554672 CD22P20273 847 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 S1PR1P21453 382 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 NT5EP21589 574 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 GPX3P22352 226 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 IGFBP5P24593 272 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 CNTFP26441 200 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 PIK3R1P27986 724 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 PPICP45877 212 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 VPS41P49754 854 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 RAP1GDS1P52306 607 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 TPD52P55327 224 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-229ENST00000554672 HNRNPH2P55795 449 aaKnown RBP4.28□□□□□ -1.72
ATXN3-229ENST00000554672 CTBP2P56545 445 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 CHIT1Q13231 466 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 E2F2Q14209 437 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 CRYMQ14894 314 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 RAB35Q15286 201 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 TGFBIQ15582 683 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 TSNQ15631 228 aaKnown RBP4.28□□□□□ -1.72
ATXN3-229ENST00000554672 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.28□□□□□ -1.72
ATXN3-229ENST00000554672 CTU2Q2VPK5 515 aaKnown RBP4.28□□□□□ -1.72
ATXN3-229ENST00000554672 GLYR1Q49A26 553 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-229ENST00000554672 PDLIM3Q53GG5 364 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-229ENST00000554672 SPANXN3Q5MJ09 141 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 TEDDM1Q5T9Z0 273 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 C6orf163Q5TEZ5 329 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 OR5M10Q6IEU7 315 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 SULT1C3Q6IMI6 304 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 CYP20A1Q6UW02 462 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 GPSM1Q86YR5 675 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 METTL25Q8N6Q8 603 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 OR7G3Q8NG95 312 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 OR4K17Q8NGC6 315 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 OR4K14Q8NGD5 310 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 ZFAND2BQ8WV99 257 aa4.28□□□□□ -1.72
ATXN3-229ENST00000554672 NEUROG1Q92886 237 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms