RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SSTP61278 116 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 GGTA1PQ4G0N0 100 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 ACSM3Q53FZ2 586 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 LILRA2Q8N149 483 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 CYB561A3Q8NBI2 242 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 TMEM185AQ8NFB2 350 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 ADAMTS14Q8WXS8 1223 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 PEX11GQ96HA9 241 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 KLF16Q9BXK1 252 aaPredicted RBP13.14□□□□□ -0.31
VTI1B-204ENST00000554659 ARHGAP39Q9C0H5 1083 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 NAA50Q9GZZ1 169 aaKnown RBP13.14□□□□□ -0.31
VTI1B-204ENST00000554659 APMAPQ9HDC9 416 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 RAB3DO95716 219 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 ACP2P11117 423 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 MSX1P28360 303 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 FASLGP48023 281 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 TCTE1Q5JU00 501 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 MPP7Q5T2T1 576 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 KIAA1211LQ6NV74 962 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 ZNF704Q6ZNC4 412 aaPredicted RBP13.14□□□□□ -0.31
VTI1B-204ENST00000554659 OR13F1Q8NGS4 319 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 ZNF587Q96SQ5 575 aaPredicted RBP13.14□□□□□ -0.31
VTI1B-204ENST00000554659 SYT3Q9BQG1 590 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 LSM5Q9Y4Y9 91 aaKnown RBP13.14□□□□□ -0.31
VTI1B-204ENST00000554659 PRSS21Q9Y6M0 314 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 A6NLC8 198 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 ALDOBP05062 364 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 AKAIN1P0CW23 69 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 HOXB9P17482 250 aaPredicted RBP13.14□□□□□ -0.31
VTI1B-204ENST00000554659 EIF2DP41214 584 aaKnown RBP13.14□□□□□ -0.31
VTI1B-204ENST00000554659 FGL2Q14314 439 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 GRM7Q14831 915 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 LILRB2Q8N423 598 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 ASB11Q8WXH4 323 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 NT5C3BQ969T7 300 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 DDIT4LQ96D03 193 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 DDX31Q9H8H2 851 aaKnown RBP13.14□□□□□ -0.31
VTI1B-204ENST00000554659 TMEM100Q9NV29 134 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 B3GALT1Q9Y5Z6 326 aa13.14□□□□□ -0.31
VTI1B-204ENST00000554659 SMAD6O43541 496 aaKnown RBP13.13□□□□□ -0.31
VTI1B-204ENST00000554659 HPGDSO60760 199 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 KNG1P01042 644 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 RPS5P46782 204 aaKnown RBP13.13□□□□□ -0.31
VTI1B-204ENST00000554659 SSX2Q16385 188 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 C14orf28Q4W4Y0 310 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 CPXM2Q8N436 756 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 OR51L1Q8NGJ5 315 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 SNAPC3Q92966 411 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 OR1F2PQ96R84 312 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 SLAMF8Q9P0V8 285 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 APOBEC3BQ9UH17 382 aaKnown RBP13.13□□□□□ -0.31
VTI1B-204ENST00000554659 A0A0U1RQK1 487 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 ARPC1BO15143 372 aaKnown RBP13.13□□□□□ -0.31
VTI1B-204ENST00000554659 EGFP01133 1207 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 AOAHP28039 575 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 RBM39Q14498 530 aaKnown RBP13.13□□□□□ -0.31
VTI1B-204ENST00000554659 BCL7AQ4VC05 210 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 FCRLBQ6BAA4 426 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 PODNL1Q6PEZ8 512 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 MZB1Q8WU39 189 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 TSACCQ96A04 125 aaPredicted RBP13.13□□□□□ -0.31
VTI1B-204ENST00000554659 IL37Q9NZH6 218 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 A0A0U1RQS6 177 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 CRABP1P29762 137 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 SLC6A8P48029 635 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 ECH1Q13011 328 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 RUNX3Q13761 415 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 MLC1Q15049 377 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 POU4F3Q15319 338 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 DPY19L2P1Q6NXN4 242 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 HSD11B1LQ7Z5J1 315 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 BRIX1Q8TDN6 353 aaKnown RBP13.13□□□□□ -0.31
VTI1B-204ENST00000554659 OR14A2Q96R54 314 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 VRK1Q99986 396 aaPredicted RBP13.13□□□□□ -0.31
VTI1B-204ENST00000554659 MFFQ9GZY8 342 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 LOC105369274A0A096LPK9 316 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 SYT7O43581 403 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 JUNDP17535 347 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 DLSTP36957 453 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 SERTAD2Q14140 314 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 OR4N4Q8N0Y3 316 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 KCNJ16Q9NPI9 418 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 ENTPD2Q9Y5L3 495 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 IER3IP1Q9Y5U9 82 aa13.13□□□□□ -0.31
VTI1B-204ENST00000554659 HSBP1L1C9JCN9 74 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 DCNP07585 359 aaKnown RBP13.12□□□□□ -0.31
VTI1B-204ENST00000554659 FUT1P19526 365 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 ITGB7P26010 798 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 PGGHGQ32M88 737 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 SLC6A19Q695T7 634 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 METAP1DQ6UB28 335 aaPredicted RBP13.12□□□□□ -0.31
VTI1B-204ENST00000554659 METTL4Q8N3J2 472 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 DNAJC22Q8N4W6 341 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 TANKQ92844 425 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 FOXJ1Q92949 421 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 BABAM2Q9NXR7 383 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 ABRACLQ9P1F3 81 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 GNG13Q9P2W3 67 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 GMEB2Q9UKD1 530 aa13.12□□□□□ -0.31
VTI1B-204ENST00000554659 RNF215Q9Y6U7 377 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms