RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 CPNE4Q96A23 557 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 FAM122AQ96E09 287 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TOE1Q96GM8 510 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 CENPNQ96H22 339 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 LCORQ96JN0 433 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ZBTB26Q9HCK0 441 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SNX15Q9NRS6 342 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 NOCTQ9UK39 431 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 MAN2B2Q9Y2E5 1009 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 MMP24Q9Y5R2 645 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 A0A0G2JMP0 313 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 IDO1P14902 403 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PSMA1P25786 263 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 HTR3AP46098 478 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PDZD11Q5EBL8 140 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 HIST2H3PS2Q5TEC6 136 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 LAPTM4BQ86VI4 370 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 OR4M2Q8NGB6 313 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TM9SF4Q92544 642 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 WDR76Q9H967 626 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PPT2Q9UMR5 302 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 CREBBPQ92793 2442 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PLSCR5A0PG75 271 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 MEIS2O14770 477 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 NME2P22392 152 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 GFRA1P56159 465 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 NFATC3Q12968 1075 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 IFI44LQ53G44 452 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SPATA46Q5T0L3 261 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 UNC5DQ6UXZ4 953 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 USP43Q70EL4 1123 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 YTHDF3Q7Z739 585 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 OR4L1Q8NH43 312 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SNIP1Q8TAD8 396 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SMAP2Q8WU79 429 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 OR5B12Q96R08 314 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PRDM7Q9NQW5 492 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TMED5Q9Y3A6 229 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TP53I11O14683 189 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 OR2T1O43869 369 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 AWAT2Q6E213 333 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ETFRF1Q6IPR1 90 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TMEM53Q6P2H8 277 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TSPYL5Q86VY4 417 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SAMD12Q8N8I0 201 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 KAZALD1Q96I82 304 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 EDEM2Q9BV94 578 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 H3BSA7 217 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 WNT9AO14904 365 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 RPP40O75818 363 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 LGI1O95970 557 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 HNRNPA2B1P22626 353 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PTGER4P35408 488 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PSMA6P60900 246 aaKnown RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 RRAS2P62070 204 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 RBPJQ06330 500 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 GKN2Q86XP6 184 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 RELL2Q8NC24 303 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 OR10AD1Q8NGE0 317 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 COQ10BQ9H8M1 238 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TCRBV7S3A2A0A539 114 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 HSBP1L1C9JCN9 74 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 RNASEK-C17orf49H0YIS7 233 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 CLIC1O00299 241 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TLX2O43763 284 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 CLPSP04118 112 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 GSTT2P0CG29 244 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 IFNGR1P15260 489 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 LTBRP36941 435 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 BST1Q10588 318 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 AGERQ15109 404 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ELP2Q6IA86 826 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 OR4C15Q8NGM1 316 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SNX22Q96L94 193 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 OR51E2Q9H255 320 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 MED20Q9H944 212 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 C19orf25Q9UFG5 118 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 MMACHCQ9Y4U1 282 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ST8SIA5O15466 376 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ADH1BP00325 375 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF17P17021 662 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 P2RY2P41231 377 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ADPRMQ3LIE5 342 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 DEFB121Q5J5C9 76 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SBSNQ6UWP8 590 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TGIF2LYQ8IUE0 185 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 OR2M7Q8NG81 312 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 STARD8Q92502 1023 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 P2RY11Q96G91 374 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 C11orf84Q9BUA3 381 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 ZNF230Q9UIE0 474 aaPredicted RBP3.12□□□□□ -1.91
SYNE2-212ENST00000554584 TRAV18A0A075B6X5 111 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 PPP2CBP62714 309 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SLC7A9P82251 487 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 OR5I1Q13606 314 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 C3orf36Q3SXR2 165 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 LYRM7Q5U5X0 104 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 LHFPL3Q86UP9 236 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 RGMAQ96B86 450 aa3.12□□□□□ -1.91
SYNE2-212ENST00000554584 SNX18Q96RF0 628 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms