RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 MBD3L2Q8NHZ7 208 aaPredicted RBP13.88□□□□□ -0.19
SHMT2-204ENST00000553324 PHOSPHO1Q8TCT1 267 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 CKAP2Q8WWK9 683 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 XAGE5Q8WWM1 108 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 MAGEB18Q96M61 343 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 OR52B2Q96RD2 323 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 TUBA1CQ9BQE3 449 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 SLC35A5Q9BS91 424 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 CCDC28BQ9BUN5 200 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 SLCO1B3Q9NPD5 702 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 TCF7L2Q9NQB0 619 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 POLE3Q9NRF9 147 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 ZNF337Q9Y3M9 751 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 DTNAQ9Y4J8 743 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 KCNE3Q9Y6H6 103 aa13.88□□□□□ -0.19
SHMT2-204ENST00000553324 ADGRG4Q8IZF6 3080 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 OR2M5A3KFT3 312 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 C7orf72A4D263 438 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 CYSRT1A8MQ03 144 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 RFXANKO14593 260 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 HCRTR2O43614 444 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 RCBTB2O95199 551 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 KRT75O95678 551 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 IL18BPO95998 194 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 OR12D1P0DN82 309 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 CTSSP25774 331 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 OPRM1P35372 400 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 EIF1P41567 113 aaKnown RBP13.87□□□□□ -0.19
SHMT2-204ENST00000553324 KHKP50053 298 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 CLDN18P56856 261 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 RPS3AP61247 264 aaKnown RBP13.87□□□□□ -0.19
SHMT2-204ENST00000553324 STX1BP61266 288 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 RPS26P62854 115 aaKnown RBP13.87□□□□□ -0.19
SHMT2-204ENST00000553324 TFF3Q07654 80 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 AP1ARQ63HQ0 302 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 HEPHL1Q6MZM0 1159 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 CLEC4FQ8N1N0 589 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 TNIP2Q8NFZ5 429 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 OR51I1Q9H343 314 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 LIPT1Q9Y234 373 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 CRYBG3Q68DQ2 2970 aa13.87□□□□□ -0.19
SHMT2-204ENST00000553324 CELSR2Q9HCU4 2923 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 NKX2-6A6NCS4 301 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 CLCA1A8K7I4 914 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 C17orf51A8MQB3 221 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 NPIPB9F8W1W9 429 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 C19orf84I3L1E1 186 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 SYT5O00445 386 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 EIF4E2O60573 245 aaKnown RBP13.86□□□□□ -0.19
SHMT2-204ENST00000553324 TNFRSF21O75509 655 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 TCEA1P23193 301 aaKnown RBP13.86□□□□□ -0.19
SHMT2-204ENST00000553324 ADH6P28332 368 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 MRPL19P49406 292 aaKnown RBP13.86□□□□□ -0.19
SHMT2-204ENST00000553324 IDH3AP50213 366 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 P2RX1P51575 399 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 POLR2JP52435 117 aaKnown RBP13.86□□□□□ -0.19
SHMT2-204ENST00000553324 SUMO3P55854 103 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-204ENST00000553324 TMEM44Q2T9K0 475 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 OR2A2Q6IF42 318 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 ARSKQ6UWY0 536 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 LIX1LQ8IVB5 337 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 MCEMP1Q8IX19 187 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 GTPBP8Q8N3Z3 284 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-204ENST00000553324 GATSQ8NAP1 163 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 ACBD4Q8NC06 268 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 SH3YL1Q96HL8 342 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-204ENST00000553324 ITCHQ96J02 903 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 ZNF350Q9GZX5 532 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 MED17Q9NVC6 651 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 TMEM45AQ9NWC5 275 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 PAQR5Q9NXK6 330 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-204ENST00000553324 FOXD3Q9UJU5 478 aaPredicted RBP13.86□□□□□ -0.19
SHMT2-204ENST00000553324 VDAC3Q9Y277 283 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 UNC79Q9P2D8 2635 aa13.86□□□□□ -0.19
SHMT2-204ENST00000553324 PHF3Q92576 2039 aaKnown RBP13.85□□□□□ -0.19
SHMT2-204ENST00000553324 FAM234BA2RU67 622 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 H3BML4 177 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 GMFGO60234 142 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 SASH3O75995 380 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 ANP32DO95626 131 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 ZCCHC18P0CG32 403 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 TMIGD3P0DMS9 266 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-204ENST00000553324 BMP5P22003 454 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 ME2P23368 584 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 AQP5P55064 265 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 RAC1P63000 192 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 HPCAP84074 193 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 GPR68Q15743 365 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 CD226Q15762 336 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 ZNF141Q15928 474 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 TNFAIP8L2Q6P589 184 aaPredicted RBP13.85□□□□□ -0.19
SHMT2-204ENST00000553324 MEX3BQ6ZN04 569 aaKnown RBP13.85□□□□□ -0.19
SHMT2-204ENST00000553324 P4HA3Q7Z4N8 544 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 GDF7Q7Z4P5 450 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 GRAMD2AQ8IUY3 354 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 TOR1AIP2Q8NFQ8 470 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 STON2Q8WXE9 905 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 PMM1Q92871 262 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 ROPN1LQ96C74 230 aa13.85□□□□□ -0.19
SHMT2-204ENST00000553324 TREX2Q9BQ50 279 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms