RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 KCNE2Q9Y6J6 123 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 AP1M2Q9Y6Q5 423 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 RNF215Q9Y6U7 377 aa4.41□□□□□ -1.7
ATXN3-218ENST00000553309 NSD1Q96L73 2696 aaPredicted RBP4.4□□□□□ -1.7
ATXN3-218ENST00000553309 CTAGE15A4D2H0 777 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 PCP4L1A6NKN8 68 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 HSBP1L1C9JCN9 74 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 ATP6V1G2-DDX39BF2Z307 99 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 OGTO15294 1046 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 TXNL1O43396 289 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 NOS1APO75052 506 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-218ENST00000553309 CDC123O75794 336 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-218ENST00000553309 RBBP9O75884 186 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 IL1BP01584 269 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 NR2F2P24468 414 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 ITGA3P26006 1051 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 DRD3P35462 400 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 NUMBP49757 651 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 LIG4P49917 911 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 CARD18P57730 90 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 SLC26A5P58743 744 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 STX1BP61266 288 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 NAA20P61599 178 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 MRPS34P82930 218 aaKnown RBP4.4□□□□□ -1.71
ATXN3-218ENST00000553309 ZFP36L1Q07352 338 aaKnown RBP4.4□□□□□ -1.71
ATXN3-218ENST00000553309 CHAF1BQ13112 559 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 RAPSNQ13702 412 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 DPYSL2Q16555 572 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 SGCAQ16586 387 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 TSTQ16762 297 aaKnown RBP4.4□□□□□ -1.71
ATXN3-218ENST00000553309 HSP90AA4PQ58FG1 418 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 DUPD1Q68J44 220 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 RAB12Q6IQ22 244 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 CLEC2AQ6UVW9 174 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 GCNT7Q6ZNI0 430 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 Q6ZSR6 202 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 UTS2BQ765I0 119 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 PIWIL4Q7Z3Z4 852 aaKnown RBP4.4□□□□□ -1.71
ATXN3-218ENST00000553309 PRUNE1Q86TP1 453 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 CTAGE6Q86UF2 777 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 ADIPOR2Q86V24 386 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 VSIG1Q86XK7 387 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 STK40Q8N2I9 435 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 TMEM86AQ8N2M4 240 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 RASGEF1CQ8N431 466 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 STPG4Q8N801 248 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 NIPA2Q8N8Q9 360 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 ANKFN1Q8N957 763 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 PCYOX1LQ8NBM8 494 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 RBM15BQ8NDT2 890 aaKnown RBP4.4□□□□□ -1.71
ATXN3-218ENST00000553309 OR56B2PQ8NGI1 322 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 ART4Q93070 314 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 VPS33AQ96AX1 596 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 SNRNP40Q96DI7 357 aaKnown RBP4.4□□□□□ -1.71
ATXN3-218ENST00000553309 KCNK16Q96T55 309 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 CCM2Q9BSQ5 444 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 TBCDQ9BTW9 1192 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 ACPTQ9BZG2 426 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 ABCG8Q9H221 673 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 LRRN3Q9H3W5 708 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 RNPEPL1Q9HAU8 725 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 S100A14Q9HCY8 104 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 OSER1Q9NX31 292 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 ADAM22Q9P0K1 906 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 RPS6KA6Q9UK32 745 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 SCML1Q9UN30 329 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 STK38LQ9Y2H1 464 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 TDRKHQ9Y2W6 561 aaKnown RBP4.4□□□□□ -1.71
ATXN3-218ENST00000553309 KLF2Q9Y5W3 355 aaPredicted RBP4.4□□□□□ -1.71
ATXN3-218ENST00000553309 CSNK1G3Q9Y6M4 447 aa4.4□□□□□ -1.71
ATXN3-218ENST00000553309 FLNAP21333 2647 aaKnown RBP4.4□□□□□ -1.71
ATXN3-218ENST00000553309 ABCA4P78363 2273 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 POLEQ07864 2286 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 ZSCAN5CA6NGD5 496 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-218ENST00000553309 ZNF98A6NK75 572 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 SMIM1B2RUZ4 78 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 ANKRD66B4E2M5 251 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 H0YCG3 227 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 ACOX3O15254 700 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 PCDH7O60245 1069 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 PRKNO60260 465 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-218ENST00000553309 NDUFS3O75489 264 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 GOSR1O95249 250 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 CSF2P04141 144 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 CLEC3BP05452 202 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 CALB1P05937 261 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 ADRB2P07550 413 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 KRT19P08727 400 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 QDPRP09417 244 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 PAEPP09466 180 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 ZDHHC11BP0C7U3 371 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 OCM2P0CE71 109 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 OCMP0CE72 109 aaPredicted RBP4.39□□□□□ -1.71
ATXN3-218ENST00000553309 CLUP10909 449 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 ICAM2P13598 275 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 F8A1P23610 371 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 HTR1EP28566 365 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 GTF2H1P32780 548 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 CD70P32970 193 aa4.39□□□□□ -1.71
ATXN3-218ENST00000553309 ATP5C1P36542 298 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms