RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 TEX51A0A1B0GUA7 166 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 CDC14CA4D256 554 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 OR1Q1Q15612 314 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 C6orf141Q5SZD1 244 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 SLC29A4Q7RTT9 530 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 CMIPQ8IY22 773 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 NLGN4XQ8N0W4 816 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 C17orf47Q8NEP4 570 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 ARSGQ96EG1 525 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 APOL4Q9BPW4 351 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 MRPS26Q9BYN8 205 aaKnown RBP18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 STRADBQ9C0K7 418 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 ENOPH1Q9UHY7 261 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 NXT1Q9UKK6 140 aaKnown RBP18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 SERINC4A6NH21 518 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 LYPD3O95274 346 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 TFAP2AP05549 437 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 ATP6V1B1P15313 513 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 TGM1P22735 817 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 CHMP24386 653 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 ACAA2P42765 397 aaKnown RBP18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 NR0B1P51843 470 aaKnown RBP18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 UGT2B15P54855 530 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 CDH15P55291 814 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 ESRRGP62508 458 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 IL5RAQ01344 420 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 CDK5R2Q13319 367 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 ZSWIM7Q19AV6 140 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 FAM69BQ5VUD6 431 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 HLA-DQA1Q5Y7H0 255 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 CD300LDQ6UXZ3 194 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 CPEB2Q7Z5Q1 589 aaKnown RBP18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 PRSS33Q8NF86 280 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 TOR1AIP2Q8NFQ8 470 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 HDAC2Q92769 488 aaKnown RBP18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 MR1Q95460 341 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 SLC35B4Q969S0 331 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 UBQLN4Q9NRR5 601 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 SLC7A7Q9UM01 511 aa18.01■□□□□ 0.47
RBFOX1-215ENST00000553186 PMS2P1A4D2B8 440 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 TRAPPC13A5PLN9 417 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 CLPTM1O96005 669 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 GGT2P36268 569 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 DCAF12Q5T6F0 453 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 PAPD4Q6PIY7 484 aaKnown RBP18■□□□□ 0.47
RBFOX1-215ENST00000553186 RAB11FIP2Q7L804 512 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 CNIH3Q8TBE1 160 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 OIT3Q8WWZ8 545 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 ACOT11Q8WXI4 607 aaPredicted RBP18■□□□□ 0.47
RBFOX1-215ENST00000553186 UBE2FQ969M7 185 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 PRSS27Q9BQR3 290 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 HOXD1Q9GZZ0 328 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 ABCB7O75027 752 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 KLF7O75840 302 aaPredicted RBP18■□□□□ 0.47
RBFOX1-215ENST00000553186 TP53P04637 393 aaPredicted RBP18■□□□□ 0.47
RBFOX1-215ENST00000553186 OSMP13725 252 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 CRISP1P54107 249 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 RAB15P59190 212 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 RNF4P78317 190 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 PTGES3Q15185 160 aaKnown RBP18■□□□□ 0.47
RBFOX1-215ENST00000553186 FNDC7Q5VTL7 733 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 ZNF730Q6ZMV8 503 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 PRR22Q8IZ63 422 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 GALNT6Q8NCL4 622 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 TMEM255BQ8WV15 326 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 C8orf44Q96CB5 159 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 ADOQ96SZ5 270 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 AASSQ9UDR5 926 aa18■□□□□ 0.47
RBFOX1-215ENST00000553186 MRTO4Q9UKD2 239 aaKnown RBP18■□□□□ 0.47
RBFOX1-215ENST00000553186 TSPAN2O60636 221 aa17.99■□□□□ 0.47
RBFOX1-215ENST00000553186 CRHBPP24387 322 aa17.99■□□□□ 0.47
RBFOX1-215ENST00000553186 COX10Q12887 443 aa17.99■□□□□ 0.47
RBFOX1-215ENST00000553186 MAD2L1BPQ15013 274 aaPredicted RBP17.99■□□□□ 0.47
RBFOX1-215ENST00000553186 DESI1Q6ICB0 168 aa17.99■□□□□ 0.47
RBFOX1-215ENST00000553186 APOOLQ6UXV4 268 aa17.99■□□□□ 0.47
RBFOX1-215ENST00000553186 WDR88Q6ZMY6 472 aa17.99■□□□□ 0.47
RBFOX1-215ENST00000553186 PRICKLE2Q7Z3G6 844 aa17.99■□□□□ 0.47
RBFOX1-215ENST00000553186 APLFQ8IW19 511 aaPredicted RBP17.99■□□□□ 0.47
RBFOX1-215ENST00000553186 HSPBAP1Q96EW2 488 aa17.99■□□□□ 0.47
RBFOX1-215ENST00000553186 LIN37Q96GY3 246 aaPredicted RBP17.99■□□□□ 0.47
RBFOX1-215ENST00000553186 LPAR4Q99677 370 aa17.99■□□□□ 0.47
RBFOX1-215ENST00000553186 ZNF559Q9BR84 538 aa17.99■□□□□ 0.47
RBFOX1-215ENST00000553186 PCDHGA1Q9Y5H4 931 aa17.99■□□□□ 0.47
RBFOX1-215ENST00000553186 TRIM64CA6NLI5 447 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 ZAR1LA6NP61 321 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 TMX2-CTNND1H3BSU7 103 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 LRP3O75074 770 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 UTS2O95399 124 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 ABCD3P28288 659 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 ADH7P40394 386 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 OMPP47874 163 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 GSSP48637 474 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 NCF4Q15080 339 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 NDUFAF6Q330K2 333 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 RBM48Q5RL73 367 aaKnown RBP17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 ENTHD1Q8IYW4 607 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 FAM71CQ8NEG0 241 aa17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 GPN3Q9UHW5 284 aaPredicted RBP17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 CSO75390 466 aaKnown RBP17.98■□□□□ 0.47
RBFOX1-215ENST00000553186 CSTAP01040 98 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms