RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 SLC38A2Q96QD8 506 aa8.4□□□□□ -1.06
RAB3IP-218ENST00000553099 OR5M11Q96RB7 305 aa8.4□□□□□ -1.06
RAB3IP-218ENST00000553099 LMF1Q96S06 567 aa8.4□□□□□ -1.06
RAB3IP-218ENST00000553099 POLDIP3Q9BY77 421 aaKnown RBP8.4□□□□□ -1.06
RAB3IP-218ENST00000553099 CHRNA10Q9GZZ6 450 aa8.4□□□□□ -1.06
RAB3IP-218ENST00000553099 TMEM27Q9HBJ8 222 aa8.4□□□□□ -1.06
RAB3IP-218ENST00000553099 ATP13A2Q9NQ11 1180 aa8.4□□□□□ -1.06
RAB3IP-218ENST00000553099 POLE3Q9NRF9 147 aa8.4□□□□□ -1.06
RAB3IP-218ENST00000553099 NLGN3Q9NZ94 848 aa8.4□□□□□ -1.06
RAB3IP-218ENST00000553099 CNOT2Q9NZN8 540 aaKnown RBP8.4□□□□□ -1.06
RAB3IP-218ENST00000553099 SERTAD3Q9UJW9 196 aa8.4□□□□□ -1.06
RAB3IP-218ENST00000553099 RPL36Q9Y3U8 105 aaKnown RBP8.4□□□□□ -1.06
RAB3IP-218ENST00000553099 CLCA3PQ9Y6N3 262 aa8.4□□□□□ -1.06
RAB3IP-218ENST00000553099 MN1Q10571 1320 aaPredicted RBP8.4□□□□□ -1.06
RAB3IP-218ENST00000553099 A0A0C4DFX4 3053 aa8.4□□□□□ -1.06
RAB3IP-218ENST00000553099 H3BMH7 237 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 GNB5O14775 395 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 SAGP10523 405 aaPredicted RBP8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 CKMT1AP12532 417 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 IFI30P13284 250 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 FPR3P25089 353 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 ACVR2AP27037 513 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 TGFBR2P37173 567 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 CLK1P49759 484 aaKnown RBP8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 ENTPD1P49961 510 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 CSTF1Q05048 431 aaKnown RBP8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 FUT7Q11130 342 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 NDUFAF6Q330K2 333 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 SYT14P1Q58G82 188 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 ARMCX4Q5H9R4 360 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 GATSQ8NAP1 163 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 OR2I1PQ8NGU4 316 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 TMEM239Q8WW34 195 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 OTULINQ96BN8 352 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 SENP5Q96HI0 755 aaPredicted RBP8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 GAL3ST4Q96RP7 486 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 PRSS27Q9BQR3 290 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 G6PC3Q9BUM1 346 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 SLC25A19Q9HC21 320 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 ZNF304Q9HCX3 659 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 LANCL2Q9NS86 450 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 C20orf141Q9NUB4 165 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 NUP210LQ5VU65 1888 aa8.4□□□□□ -1.07
RAB3IP-218ENST00000553099 LOC100506127A0A0U1RQW1 187 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 TRIM64BA6NI03 449 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 EFCAB9A8MZ26 197 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 M0R082 166 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 SLC22A1O15245 554 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 DYRK3O43781 588 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 GCGRP47871 477 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 FOXL2P58012 376 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 HLA-BQ31612 363 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 ZNF620Q6ZNG0 422 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 SHISA6Q6ZSJ9 500 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 TMPRSS9Q7Z410 1059 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 SLCO6A1Q86UG4 719 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 TMEM151BQ8IW70 566 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 BCORP1Q8N888 145 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 GAB3Q8WWW8 586 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 HOXB13Q92826 284 aaPredicted RBP8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 SLC41A2Q96JW4 573 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 PELOQ9BRX2 385 aaKnown RBP8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 PRRG3Q9BZD7 231 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 TECTAO75443 2155 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 NCOR1O75376 2440 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 AIREO43918 545 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 ADAM11O75078 769 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 SOX30O94993 753 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 HPGDP15428 266 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 GADD45AP24522 165 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 SLC15A1P46059 708 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 DCTN2Q13561 401 aaKnown RBP8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 NSDHLQ15738 373 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 ALG10BQ5I7T1 473 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 TMEM201Q5SNT2 666 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 PERM1Q5SV97 790 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 FAAH2Q6GMR7 532 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 WDR74Q6RFH5 385 aaPredicted RBP8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 SMARCD3Q6STE5 483 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 CARFQ8N187 725 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 ZNF615Q8N8J6 731 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 POGLUT1Q8NBL1 392 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 OR4C3Q8NH37 302 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 C9orf43Q8TAL5 461 aaPredicted RBP8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 TBC1D15Q8TC07 691 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 FANK1Q8TC84 345 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 PTPMT1Q8WUK0 201 aaPredicted RBP8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 OSTF1Q92882 214 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 MVB12AQ96EY5 273 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 TMEM80Q96HE8 168 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 SAMD8Q96LT4 415 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 ZNF578Q96N58 590 aaPredicted RBP8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 ZNF582Q96NG8 517 aaPredicted RBP8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 OR1F2PQ96R84 312 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 ZNF559Q9BR84 538 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 IER2Q9BTL4 223 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 DUSP23Q9BVJ7 150 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 TEX12Q9BXU0 123 aa8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 ZBTB20Q9HC78 741 aaPredicted RBP8.39□□□□□ -1.07
RAB3IP-218ENST00000553099 DNAJB12Q9NXW2 375 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms