RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 CFL1P23528 166 aaKnown RBP4.53□□□□□ -1.68
LIMA1-214ENST00000552783 MAPK9P45984 424 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 HCCSP53701 268 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 UBE2MP61081 183 aaKnown RBP4.53□□□□□ -1.68
LIMA1-214ENST00000552783 ERVK-21P61565 698 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 DUSP2Q05923 314 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 TMEM115Q12893 351 aaPredicted RBP4.53□□□□□ -1.68
LIMA1-214ENST00000552783 FGL2Q14314 439 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 OPCMLQ14982 345 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 TCTN1Q2MV58 587 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 C2orf68Q2NKX9 166 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 FAM74A3Q4VXF1 159 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 FAM26DQ5JW98 314 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 HBMQ6B0K9 141 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 CPOQ8IVL8 374 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 LINC00518Q8N0U6 118 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 MOSPD2Q8NHP6 518 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 COL26A1Q96A83 441 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 ELMOD3Q96FG2 381 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 RADILQ96JH8 1075 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 ZSWIM3Q96MP5 696 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 SLC46A2Q9BY10 475 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 ZNF436Q9C0F3 470 aaPredicted RBP4.53□□□□□ -1.68
LIMA1-214ENST00000552783 OR10A4Q9H209 315 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 OR51I1Q9H343 314 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 FKRPQ9H9S5 495 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 CERS4Q9HA82 394 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 A4GALTQ9NPC4 353 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 MYNNQ9NPC7 610 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 EQTNQ9NQ60 294 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 KLHL1Q9NR64 748 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 CXXC1Q9P0U4 656 aaPredicted RBP4.53□□□□□ -1.68
LIMA1-214ENST00000552783 ZMIZ1Q9ULJ6 1067 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 FKBP7Q9Y680 259 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 ANTXRLA6NF34 631 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 J3QRE1 110 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 SURF4O15260 269 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 LATO43561 262 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 SLC19A2O60779 497 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 MMP20O60882 483 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 FGF18O76093 207 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 SIX6O95475 246 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 PLATP00750 562 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 SRPRAP08240 638 aaKnown RBP4.53□□□□□ -1.68
LIMA1-214ENST00000552783 H2AFB2P0C5Z0 115 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 IL9P15248 144 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 ATF1P18846 271 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 NPR2P20594 1047 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 ZP3P21754 424 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 HSD3B2P26439 372 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 CST5P28325 142 aaPredicted RBP4.53□□□□□ -1.68
LIMA1-214ENST00000552783 CTNNB1P35222 781 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 NUP62P37198 522 aaPredicted RBP4.53□□□□□ -1.68
LIMA1-214ENST00000552783 RAD52P43351 418 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 CLDN2P57739 230 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 SP140Q13342 867 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 DUSP6Q16828 381 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 ASTLQ6HA08 431 aaPredicted RBP4.53□□□□□ -1.68
LIMA1-214ENST00000552783 OR5M10Q6IEU7 315 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 MZT2AQ6P582 158 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 CD300LDQ6UXZ3 194 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 SSX6Q7RTT6 188 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 LRRC28Q86X40 367 aaPredicted RBP4.53□□□□□ -1.68
LIMA1-214ENST00000552783 VRK2Q86Y07 508 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 TOMM5Q8N4H5 51 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 ANKRD53Q8N9V6 530 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 OR10Z1Q8NGY1 313 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 KAT2AQ92830 837 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 TM4SF18Q96CE8 201 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 C16orf58Q96GQ5 468 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 OR1F2PQ96R84 312 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 LYSMD1Q96S90 227 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 FAIM2Q9BWQ8 316 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 VN1R3Q9BXE9 311 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 DPAGT1Q9H3H5 408 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 ELAC1Q9H777 363 aaKnown RBP4.53□□□□□ -1.68
LIMA1-214ENST00000552783 LYARQ9NX58 379 aaKnown RBP4.53□□□□□ -1.68
LIMA1-214ENST00000552783 POMT2Q9UKY4 750 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 MRPS23Q9Y3D9 190 aaKnown RBP4.53□□□□□ -1.68
LIMA1-214ENST00000552783 MAB21L2Q9Y586 359 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 HRH3Q9Y5N1 445 aa4.53□□□□□ -1.68
LIMA1-214ENST00000552783 SCN3AQ9NY46 2000 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 TRBV23OR9-2A0A075B6M9 112 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 TRABD2BA6NFA1 517 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 FAM170BA6NMN3 283 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 ANXA2P2A6NMY6 339 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 CHURC1-FNTBB4DL54 471 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 WASH3PC4AMC7 463 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 K7ESM1 405 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 SLC16A5O15375 505 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 ZIC2O95409 532 aaPredicted RBP4.52□□□□□ -1.69
LIMA1-214ENST00000552783 C1orf105O95561 183 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 IGF2P01344 180 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 IGHA1P01876 353 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 ZGLP1P0C6A0 271 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 LAG3P18627 525 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 OMPP47874 163 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 METAP1P53582 386 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 SLC16A1P53985 500 aa4.52□□□□□ -1.69
LIMA1-214ENST00000552783 FXYD6P3P58550 94 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms