RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 TSLPQ969D9 159 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 ZNF582Q96NG8 517 aaPredicted RBP10.64□□□□□ -0.71
RAB5C-208ENST00000551338 OR1F2PQ96R84 312 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 OR5M11Q96RB7 305 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 ZNF559Q9BR84 538 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 NUDT22Q9BRQ3 303 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 ZNF768Q9H5H4 540 aaKnown RBP10.64□□□□□ -0.71
RAB5C-208ENST00000551338 Q9N2J8 555 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 C14orf105Q9NVL8 296 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 NLGN3Q9NZ94 848 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 FLRT3Q9NZU0 649 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 GMEB2Q9UKD1 530 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.64□□□□□ -0.71
RAB5C-208ENST00000551338 LSM2Q9Y333 95 aaKnown RBP10.64□□□□□ -0.71
RAB5C-208ENST00000551338 CDH10Q9Y6N8 788 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 U3KQA8 63 aa10.64□□□□□ -0.71
RAB5C-208ENST00000551338 TNRC18O15417 2968 aaPredicted RBP10.64□□□□□ -0.71
RAB5C-208ENST00000551338 A0A0B4J2E0 115 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 A0A1B0GX12 115 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 UNC119BA6NIH7 251 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 A8MU76 341 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 C17orf105B2RV13 164 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 KDM4EB2RXH2 506 aaPredicted RBP10.63□□□□□ -0.71
RAB5C-208ENST00000551338 TLX2O43763 284 aaPredicted RBP10.63□□□□□ -0.71
RAB5C-208ENST00000551338 ADAM11O75078 769 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 CNOT3O75175 753 aaKnown RBP10.63□□□□□ -0.71
RAB5C-208ENST00000551338 CSO75390 466 aaKnown RBP10.63□□□□□ -0.71
RAB5C-208ENST00000551338 MSL3P1P0C860 447 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 ATXN8OSP0DMR3 200 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 MAKP20794 623 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 GADD45AP24522 165 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 TGFBR1P36897 503 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 ARRB1P49407 418 aaPredicted RBP10.63□□□□□ -0.71
RAB5C-208ENST00000551338 PSMD4P55036 377 aaKnown RBP10.63□□□□□ -0.71
RAB5C-208ENST00000551338 FXYD6P3P58550 94 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 VBP1P61758 197 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 RHAGQ02094 409 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 PRKCDQ05655 676 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 BIKQ13323 160 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 DCTN2Q13561 401 aaKnown RBP10.63□□□□□ -0.71
RAB5C-208ENST00000551338 DSG2Q14126 1118 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 SNAPC1Q16533 368 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.63□□□□□ -0.71
RAB5C-208ENST00000551338 PGGHGQ32M88 737 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 ARMCX4Q5H9R4 360 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 PERM1Q5SV97 790 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 ZNF613Q6PF04 617 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 WDR74Q6RFH5 385 aaPredicted RBP10.63□□□□□ -0.71
RAB5C-208ENST00000551338 QSOX2Q6ZRP7 698 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 C11orf74Q86VG3 221 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 BCORP1Q8N888 145 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 ZNF321PQ8N8H1 164 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 OR52I1Q8NGK6 324 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 DYNC2LI1Q8TCX1 351 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 TMEM239Q8WW34 195 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 ZNF501Q96CX3 271 aaPredicted RBP10.63□□□□□ -0.71
RAB5C-208ENST00000551338 TMEM80Q96HE8 168 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 PTCHD1Q96NR3 888 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 OCEL1Q9H607 264 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 ARMC7Q9H6L4 198 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.63□□□□□ -0.71
RAB5C-208ENST00000551338 IL20Q9NYY1 176 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 CBLCQ9ULV8 474 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 RPL36Q9Y3U8 105 aaKnown RBP10.63□□□□□ -0.71
RAB5C-208ENST00000551338 PCDHGA3Q9Y5H0 932 aa10.63□□□□□ -0.71
RAB5C-208ENST00000551338 COL27A1Q8IZC6 1860 aaPredicted RBP10.63□□□□□ -0.71
RAB5C-208ENST00000551338 A0A1B0GWA3 101 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 A8MUA0 341 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 EFCAB9A8MZ26 197 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 PRODHO43272 600 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 CHP2O43745 196 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 CLPXO76031 633 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 ZGLP1P0C6A0 271 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 IFI30P13284 250 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 FBLP22087 321 aaKnown RBP10.62□□□□□ -0.71
RAB5C-208ENST00000551338 CSTF2P33240 577 aaKnown RBP eCLIP10.62□□□□□ -0.71
RAB5C-208ENST00000551338 ATP12AP54707 1039 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 ZXDAP98168 799 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 NCF4Q15080 339 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 MINDY4Q4G0A6 757 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 CLEC12AQ5QGZ9 265 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 YOD1Q5VVQ6 348 aaPredicted RBP10.62□□□□□ -0.71
RAB5C-208ENST00000551338 RNLSQ5VYX0 342 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 SLC30A6Q6NXT4 461 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 TMPRSS9Q7Z410 1059 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 RNF113BQ8IZP6 322 aaKnown RBP10.62□□□□□ -0.71
RAB5C-208ENST00000551338 OR7G1Q8NGA0 311 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 OR4C6Q8NH72 309 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 MAFAQ8NHW3 353 aaPredicted RBP10.62□□□□□ -0.71
RAB5C-208ENST00000551338 BRIX1Q8TDN6 353 aaKnown RBP10.62□□□□□ -0.71
RAB5C-208ENST00000551338 PTPMT1Q8WUK0 201 aaPredicted RBP10.62□□□□□ -0.71
RAB5C-208ENST00000551338 OSTF1Q92882 214 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 SLC35B4Q969S0 331 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 LRR1Q96L50 414 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 SAMD8Q96LT4 415 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 OPALINQ96PE5 141 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 SLC38A2Q96QD8 506 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 LMF1Q96S06 567 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 NDC1Q9BTX1 674 aa10.62□□□□□ -0.71
RAB5C-208ENST00000551338 YIPF2Q9BWQ6 316 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms