RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CLDN6P56747 220 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 GABARAPL2P60520 117 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 SLC35A2P78381 396 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 FGFBP1Q14512 234 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 EBPQ15125 230 aaKnown RBP18.15■□□□□ 0.5
SSH1-209ENST00000551165 DECR1Q16698 335 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 FAM199XQ6PEV8 388 aaPredicted RBP18.15■□□□□ 0.5
SSH1-209ENST00000551165 GRHL3Q8TE85 626 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 DUSP21Q9H596 190 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 PCDHGA10Q9Y5H3 936 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 TRAPPC13A5PLN9 417 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 DYRK3O43781 588 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 RAB39AQ14964 217 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 APOOLQ6UXV4 268 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 ZNF540Q8NDQ6 660 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 DAZLQ92904 295 aaKnown RBP18.15■□□□□ 0.5
SSH1-209ENST00000551165 IL4I1Q96RQ9 567 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 NODALQ96S42 347 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 CXorf56Q9H5V9 222 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 IMPAD1Q9NX62 359 aa18.15■□□□□ 0.5
SSH1-209ENST00000551165 C2orf92A0A1B0GVN3 265 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 CDX4O14627 284 aaPredicted RBP18.14■□□□□ 0.49
SSH1-209ENST00000551165 GUSBP08236 651 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 FUT1P19526 365 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 GPR143P51810 404 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 CXCR4P61073 352 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 MVKQ03426 396 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.14■□□□□ 0.49
SSH1-209ENST00000551165 CD300LDQ6UXZ3 194 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 C16orf47Q6ZP98 133 aaPredicted RBP18.14■□□□□ 0.49
SSH1-209ENST00000551165 OVCH1Q7RTY7 1134 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 OR8D4Q8NGM9 314 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 OR1N1Q8NGS0 311 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 OR14A16Q8NHC5 309 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 PFN4Q8NHR9 129 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 NR4A3Q92570 626 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 NMD3Q96D46 503 aaKnown RBP18.14■□□□□ 0.49
SSH1-209ENST00000551165 LCORQ96JN0 433 aaPredicted RBP18.14■□□□□ 0.49
SSH1-209ENST00000551165 ANKRD19PQ9H560 264 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 BLOC1S6Q9UL45 172 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 KMT2EQ8IZD2 1858 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 RALGAPA1Q6GYQ0 2036 aa18.14■□□□□ 0.49
SSH1-209ENST00000551165 TEX51A0A1B0GUA7 166 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 C17orf51A8MQB3 221 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 MEN1O00255 615 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 CDC42EP2O14613 210 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 POLR1CO15160 346 aaPredicted RBP18.13■□□□□ 0.49
SSH1-209ENST00000551165 HEXBP07686 556 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 FGF5P12034 268 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 ACP1P24666 158 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 MAP2K4P45985 399 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 NR0B1P51843 470 aaKnown RBP18.13■□□□□ 0.49
SSH1-209ENST00000551165 CD226Q15762 336 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 ACSM5Q6NUN0 579 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 MBOAT2Q6ZWT7 520 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 AHSA2Q719I0 299 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 BCDIN3DQ7Z5W3 292 aaKnown RBP18.13■□□□□ 0.49
SSH1-209ENST00000551165 ANKRD37Q7Z713 158 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 DGCR14Q96DF8 476 aaKnown RBP18.13■□□□□ 0.49
SSH1-209ENST00000551165 ADOQ96SZ5 270 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 RTN4RQ9BZR6 473 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 C20orf141Q9NUB4 165 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 ZNF223Q9UK11 482 aaPredicted RBP18.13■□□□□ 0.49
SSH1-209ENST00000551165 HEATR5AQ86XA9 2040 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 COL5A1P20908 1838 aaPredicted RBP18.13■□□□□ 0.49
SSH1-209ENST00000551165 KPNA4O00629 521 aaPredicted RBP18.13■□□□□ 0.49
SSH1-209ENST00000551165 OIP5O43482 229 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 MAN1A2O60476 641 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 IFNA8P32881 189 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 ALDH6A1Q02252 535 aaKnown RBP18.13■□□□□ 0.49
SSH1-209ENST00000551165 KLHL26Q53HC5 615 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 SLX4IPQ5VYV7 408 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 RRM2BQ7LG56 351 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 P3H2Q8IVL5 708 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 LINC00471Q8N535 108 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 AGBL5Q8NDL9 886 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 LOXL4Q96JB6 756 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 SPSB2Q99619 263 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 KLHDC3Q9BQ90 382 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 ST6GALNAC1Q9NSC7 600 aaPredicted RBP18.13■□□□□ 0.49
SSH1-209ENST00000551165 SELENONQ9NZV5 590 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 TESQ9UGI8 421 aaKnown RBP18.13■□□□□ 0.49
SSH1-209ENST00000551165 PCDHGA5Q9Y5G8 931 aa18.13■□□□□ 0.49
SSH1-209ENST00000551165 COL27A1Q8IZC6 1860 aaPredicted RBP18.13■□□□□ 0.49
SSH1-209ENST00000551165 FRG2CA6NGY1 282 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 SERINC4A6NH21 518 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 ZNF883P0CG24 379 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 PCMT1P22061 227 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 CDC42P60953 191 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 COX10Q12887 443 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 GRAMD2AQ8IUY3 354 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 POGLUT1Q8NBL1 392 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 PIGXQ8TBF5 258 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 GNPDA2Q8TDQ7 276 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 C8orf44Q96CB5 159 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 WWTR1Q9GZV5 400 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 ARMC7Q9H6L4 198 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 ATP13A2Q9NQ11 1180 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 IL20RAQ9UHF4 553 aa18.12■□□□□ 0.49
SSH1-209ENST00000551165 ENOPH1Q9UHY7 261 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms