RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 SHISA9B4DS77 424 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 NPIPA2E9PIF3 369 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 H3BTX0 84 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 TYROBPO43914 113 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 GALR3O60755 368 aaPredicted RBP3.87□□□□□ -1.79
LIMA1-205ENST00000550592 TOM1L1O75674 476 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 PDE5AO76074 875 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 AKR7A3O95154 331 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 NUDT14O95848 222 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 IGSF6O95976 241 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 RENP00797 406 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 PTMAP06454 111 aaKnown RBP3.87□□□□□ -1.79
LIMA1-205ENST00000550592 MELTFP08582 738 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 HOXB7P09629 217 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 SLC35G4P0C7Q5 338 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 RRASP10301 218 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 HSD17B1P14061 328 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 HAND2P61296 217 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 FKBP1AP62942 108 aaKnown RBP3.87□□□□□ -1.79
LIMA1-205ENST00000550592 MRPS6P82932 125 aaKnown RBP3.87□□□□□ -1.79
LIMA1-205ENST00000550592 ZNF85Q03923 595 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 SIGLEC14Q08ET2 396 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 SCGB2A2Q13296 93 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 CYLC2Q14093 348 aaPredicted RBP3.87□□□□□ -1.79
LIMA1-205ENST00000550592 LEG1Q6P5S2 330 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 ABRAXAS1Q6UWZ7 409 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 APOOLQ6UXV4 268 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 CCDC110Q8TBZ0 833 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 LHX4Q969G2 390 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 MCHR2Q969V1 340 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 WBP1Q96G27 269 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 C16orf45Q96MC5 204 aaPredicted RBP3.87□□□□□ -1.79
LIMA1-205ENST00000550592 TESK2Q96S53 571 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 ATOH8Q96SQ7 321 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 TSPY26PQ9H489 355 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 RNF41Q9H4P4 317 aaPredicted RBP3.87□□□□□ -1.79
LIMA1-205ENST00000550592 ACTR8Q9H981 624 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 LIN28AQ9H9Z2 209 aaKnown RBP3.87□□□□□ -1.79
LIMA1-205ENST00000550592 ADGRL4Q9HBW9 690 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 ASH1LQ9NR48 2969 aaKnown RBP3.87□□□□□ -1.79
LIMA1-205ENST00000550592 YAE1D1Q9NRH1 226 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 ABCC13Q9NSE7 274 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 ANKMY1Q9P2S6 941 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 EPS15L1Q9UBC2 864 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 STYXL1Q9Y6J8 313 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 XIRP2A4UGR9 3374 aa3.87□□□□□ -1.79
LIMA1-205ENST00000550592 TDRD15B5MCY1 1934 aaKnown RBP3.87□□□□□ -1.79
LIMA1-205ENST00000550592 KMT2EQ8IZD2 1858 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 A0A1B0GTH9 108 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 LRIT2A6NDA9 550 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 FBLL1A6NHQ2 334 aaKnown RBP3.86□□□□□ -1.79
LIMA1-205ENST00000550592 EPOPA6NHQ4 379 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 ANKRD30BLA7E2S9 258 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 IMPA2O14732 288 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 MCF2LO15068 1137 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 IGHG3P01860 377 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 CA3P07451 260 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 SNRPCP09234 159 aaKnown RBP3.86□□□□□ -1.79
LIMA1-205ENST00000550592 SHC1P29353 583 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 MFAP2P55001 183 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 MTTPP55157 894 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 NOP14P78316 857 aaKnown RBP3.86□□□□□ -1.79
LIMA1-205ENST00000550592 SRYQ05066 204 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 BNIP1Q12981 228 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 ADPRMQ3LIE5 342 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 FAM219BQ5XKK7 198 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 SEL1L3Q68CR1 1132 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 ARSKQ6UWY0 536 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 ADAMTSL5Q6ZMM2 481 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 COPS6Q7L5N1 327 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 NET1Q7Z628 596 aaPredicted RBP3.86□□□□□ -1.79
LIMA1-205ENST00000550592 FGFRL1Q8N441 504 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 ARL14Q8N4G2 192 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 TEX9Q8N6V9 391 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 ZNF485Q8NCK3 441 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 ZBTB44Q8NCP5 570 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 NFAM1Q8NET5 270 aaPredicted RBP3.86□□□□□ -1.79
LIMA1-205ENST00000550592 OR4F17Q8NGA8 305 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 OR4Q3Q8NH05 313 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 OR4F4Q96R69 305 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 FICDQ9BVA6 458 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 TRIM9Q9C026 710 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 RWDD1Q9H446 243 aaPredicted RBP3.86□□□□□ -1.79
LIMA1-205ENST00000550592 CD209Q9NNX6 404 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 AMBNQ9NP70 447 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 FAM114A2Q9NRY5 505 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 CENPMQ9NSP4 180 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 TMOD2Q9NZR1 351 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 ISY1Q9ULR0 285 aaKnown RBP3.86□□□□□ -1.79
LIMA1-205ENST00000550592 AURKCQ9UQB9 309 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 DHRS7Q9Y394 339 aa3.86□□□□□ -1.79
LIMA1-205ENST00000550592 CACNA1FO60840 1977 aa3.85□□□□□ -1.79
LIMA1-205ENST00000550592 ZNF462Q96JM2 2506 aa3.85□□□□□ -1.79
LIMA1-205ENST00000550592 H3BMH7 237 aa3.85□□□□□ -1.79
LIMA1-205ENST00000550592 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.85□□□□□ -1.79
LIMA1-205ENST00000550592 K7EPI3 171 aa3.85□□□□□ -1.79
LIMA1-205ENST00000550592 ALOX15BO15296 676 aa3.85□□□□□ -1.79
LIMA1-205ENST00000550592 CHADO15335 359 aa3.85□□□□□ -1.79
LIMA1-205ENST00000550592 VPS26AO75436 327 aa3.85□□□□□ -1.79
LIMA1-205ENST00000550592 DPP4P27487 766 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms