RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 A0A087WZY1 265 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 OR2M5A3KFT3 312 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 H3BNH8 94 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 ZNF195O14628 629 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 AGR2O95994 175 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 IGFBP2P18065 325 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 BMP5P22003 454 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 IL12AP29459 219 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 PPP2R2AP63151 447 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 CD226Q15762 336 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 ATAD3BQ5T9A4 648 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 SAXO2Q658L1 398 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 ARSKQ6UWY0 536 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 MTERF4Q7Z6M4 381 aaKnown RBP15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 ADGRE4PQ86SQ3 457 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 LIX1LQ8IVB5 337 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 UBQLNLQ8IYU4 475 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 MEIOBQ8N635 442 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 TRIML2Q8N7C3 387 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 CHDHQ8NE62 594 aaPredicted RBP15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 NEURL3Q96EH8 262 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 SH3YL1Q96HL8 342 aaPredicted RBP15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 ZFP3Q96NJ6 502 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 OR52B2Q96RD2 323 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 OR52E6Q96RD3 313 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 PANX1Q96RD7 426 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 TM9SF2Q99805 663 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 TREX2Q9BQ50 279 aaPredicted RBP15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 TRIM8Q9BZR9 551 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 OR51I1Q9H343 314 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 SLCO1B3Q9NPD5 702 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 SDR39U1Q9NRG7 319 aaPredicted RBP15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 INTS9Q9NV88 658 aaKnown RBP15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 EXD2Q9NVH0 621 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 CLCF1Q9UBD9 225 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 ZNF629Q9UEG4 869 aaPredicted RBP15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 VDAC3Q9Y277 283 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 HEATR5AQ86XA9 2040 aa15.58■□□□□ 0.08
CHMP1A-208ENST00000550102 MYO9AB2RTY4 2548 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 NPIPA5A0A0B4J1W7 369 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 C7orf72A4D263 438 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 NPIPA7E9PJI5 369 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 NPIPB9F8W1W9 429 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 H3BML4 177 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 UBDO15205 165 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 HCRTR2O43614 444 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 STX11O75558 287 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 SLC22A3O75751 556 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 NPIPA8P0DM63 369 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 PRF1P14222 555 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 ASCL1P50553 236 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 ZNF136P52737 540 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 ATP12AP54707 1039 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 TMEM44Q2T9K0 475 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 PLPPR5Q32ZL2 321 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 KLHL26Q53HC5 615 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 TNFAIP8L2Q6P589 184 aaPredicted RBP15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 CHMP1BQ7LBR1 199 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 GRAMD2AQ8IUY3 354 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 ZNF614Q8N883 585 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 C9orf106Q8NAJ2 232 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 RELL2Q8NC24 303 aaPredicted RBP15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 OR5M1Q8NGP8 315 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 B4GALNT2Q8NHY0 566 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 PHOSPHO1Q8TCT1 267 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 WNT2BQ93097 391 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 ZBTB8AQ96BR9 441 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 UCN2Q96RP3 112 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 SDF2Q99470 211 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 NMUR2Q9GZQ4 415 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 ACBD3Q9H3P7 528 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 ZIM2Q9NZV7 527 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 STOML1Q9UBI4 398 aa15.57■□□□□ 0.08
CHMP1A-208ENST00000550102 CCDC154A6NI56 674 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 POLR3GO15318 223 aaPredicted RBP15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 SEC14L5O43304 696 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 TNFRSF21O75509 655 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 TGDSO95455 350 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 IL6P05231 212 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 TMIGD3P0DMS9 266 aaPredicted RBP15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 ANXA11P50995 505 aaKnown RBP15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 SUMO3P55854 103 aaPredicted RBP15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 EEFSECP57772 596 aaKnown RBP15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 ZNF117Q03924 483 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 ARHGAP11BQ3KRB8 267 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.56■□□□□ 0.083e-8■■■■■ 30.7
CHMP1A-208ENST00000550102 EPGNQ6UW88 154 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 MIER2Q8N344 545 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 GTPBP8Q8N3Z3 284 aaPredicted RBP15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 SMPDL3BQ92485 455 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 LRRC46Q96FV0 321 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 ZNF350Q9GZX5 532 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 TCF7L2Q9NQB0 619 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 MED17Q9NVC6 651 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 ZNF337Q9Y3M9 751 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 DTNAQ9Y4J8 743 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 AP4B1Q9Y6B7 739 aa15.56■□□□□ 0.08
CHMP1A-208ENST00000550102 SLC22A20A6NK97 555 aa15.55■□□□□ 0.08
CHMP1A-208ENST00000550102 SHISA8B8ZZ34 492 aa15.55■□□□□ 0.08
CHMP1A-208ENST00000550102 KIAA0513O60268 411 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms