RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 IGKV1-8A0A0C4DH67 115 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 CHURC1-FNTBB4DL54 471 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 PDE9AO76083 593 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 CCR5P51681 352 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 HMGA2P52926 109 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 CSNK1G2P78368 415 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 BTN3A2P78410 334 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 DEFB134Q4QY38 66 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 ZNF311Q5JNZ3 666 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 XKRXQ6PP77 449 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 PARGQ86W56 976 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 SLC37A3Q8NCC5 494 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 GRPEL2Q8TAA5 225 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 SUN5Q8TC36 379 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 TM4SF18Q96CE8 201 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 RNF170Q96K19 258 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 WDR92Q96MX6 357 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 TEFMQ96QE5 360 aaKnown RBP10.34□□□□□ -0.75
LINC00661-204ENST00000549354 ATP13A2Q9NQ11 1180 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 ICKQ9UPZ9 632 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 A0A1W2PPC1 479 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 TCRBV21S2A2A0A5A6 115 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 A6NCN8 305 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 LDB3O75112 727 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 SRFP11831 508 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 DRD5P21918 477 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 UQCRC2P22695 453 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 NOS3P29474 1203 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 PPP2R1BP30154 601 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 WNT4P56705 351 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 RGS8P57771 180 aaPredicted RBP10.34□□□□□ -0.75
LINC00661-204ENST00000549354 ABATP80404 500 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 MLLT11Q13015 90 aaPredicted RBP10.34□□□□□ -0.75
LINC00661-204ENST00000549354 MRPL28Q13084 256 aaKnown RBP10.34□□□□□ -0.75
LINC00661-204ENST00000549354 YIF1BQ5BJH7 314 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 BCL2L15Q5TBC7 163 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 FAM205BPQ63HN1 556 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 METTL27Q8N6F8 245 aaPredicted RBP10.34□□□□□ -0.75
LINC00661-204ENST00000549354 CCDC120Q96HB5 630 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 SAP130Q9H0E3 1048 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 GLIPR2Q9H4G4 154 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 SPHK1Q9NYA1 384 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 AHSPQ9NZD4 102 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 ADAM29Q9UKF5 820 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 TRAPPC4Q9Y296 219 aa10.34□□□□□ -0.75
LINC00661-204ENST00000549354 CENPVL1A0A0U1RR11 272 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 CENPBD1B2RD01 187 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 LRRN3E7EW58 273 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 LYRM1O43325 122 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 PTHLHP12272 177 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 PVRP15151 417 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 ALAS2P22557 587 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 BSGP35613 385 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 MTNR1AP48039 350 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 ARFIP1P53367 373 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 PLBD1Q6P4A8 553 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 KIAA1324Q6UXG2 1013 aaKnown RBP10.33□□□□□ -0.76
LINC00661-204ENST00000549354 CHRDL2Q6WN34 429 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 OR4M2Q8NGB6 313 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 OR52E1Q8NGJ3 308 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 CCL4L1Q8NHW4 92 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 SETD6Q8TBK2 473 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 TEX47Q8TBZ9 253 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 PDXPQ96GD0 296 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 LRRN3Q9H3W5 708 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 UBE2ZQ9H832 354 aaPredicted RBP10.33□□□□□ -0.76
LINC00661-204ENST00000549354 ISG20L2Q9H9L3 353 aaKnown RBP10.33□□□□□ -0.76
LINC00661-204ENST00000549354 ENOPH1Q9UHY7 261 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 MGAT4BQ9UQ53 548 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 AP1M2Q9Y6Q5 423 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 UNC13CQ8NB66 2214 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 LRP4O75096 1905 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 LOC105369274A0A096LPK9 316 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 LANCL1O43813 399 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 ZNF780AO75290 641 aaPredicted RBP10.33□□□□□ -0.76
LINC00661-204ENST00000549354 SAGP10523 405 aaPredicted RBP10.33□□□□□ -0.76
LINC00661-204ENST00000549354 NDUFS1P28331 727 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 SSTR2P30874 369 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 CDH11P55287 796 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 ZIC1Q15915 447 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 SERPINA12Q8IW75 414 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 OR4N4Q8N0Y3 316 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 ARL14Q8N4G2 192 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 UFD1Q92890 307 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 SENP5Q96HI0 755 aaPredicted RBP10.33□□□□□ -0.76
LINC00661-204ENST00000549354 QRFPRQ96P65 431 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 DPH1Q9BZG8 443 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 DDX31Q9H8H2 851 aaKnown RBP10.33□□□□□ -0.76
LINC00661-204ENST00000549354 GPR27Q9NS67 375 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 SLC23A1Q9UHI7 598 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 A4GNTQ9UNA3 340 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 GSTK1Q9Y2Q3 226 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 MAN2B1O00754 1011 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 DPM1O60762 260 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 CLEC3AO75596 197 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 CHRM4P08173 479 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 APEHP13798 732 aaKnown RBP10.33□□□□□ -0.76
LINC00661-204ENST00000549354 IGFBP4P22692 258 aa10.33□□□□□ -0.76
LINC00661-204ENST00000549354 PXNP49023 591 aaPredicted RBP10.33□□□□□ -0.76
LINC00661-204ENST00000549354 OR10A3P58181 314 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms