RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 HNRNPCL4P0DMR1 293 aa14.85□□□□□ -0.03
LIMS2-217ENST00000545738 SFTPCP11686 197 aa14.85□□□□□ -0.03
LIMS2-217ENST00000545738 NCK1P16333 377 aa14.85□□□□□ -0.03
LIMS2-217ENST00000545738 EEFSECP57772 596 aaKnown RBP14.85□□□□□ -0.03
LIMS2-217ENST00000545738 ZNF117Q03924 483 aa14.85□□□□□ -0.03
LIMS2-217ENST00000545738 RBBP4Q09028 425 aa14.85□□□□□ -0.03
LIMS2-217ENST00000545738 FGFBP1Q14512 234 aa14.85□□□□□ -0.03
LIMS2-217ENST00000545738 SOWAHCQ53LP3 525 aaPredicted RBP14.85□□□□□ -0.03
LIMS2-217ENST00000545738 SLC30A6Q6NXT4 461 aa14.85□□□□□ -0.03
LIMS2-217ENST00000545738 ZNF836Q6ZNA1 936 aa14.85□□□□□ -0.03
LIMS2-217ENST00000545738 TAMM41Q96BW9 452 aa14.85□□□□□ -0.03
LIMS2-217ENST00000545738 TMEM41AQ96HV5 264 aa14.85□□□□□ -0.03
LIMS2-217ENST00000545738 JSRP1Q96MG2 331 aaPredicted RBP14.85□□□□□ -0.03
LIMS2-217ENST00000545738 NPAS1Q99742 590 aa14.85□□□□□ -0.03
LIMS2-217ENST00000545738 TSPAN10Q9H1Z9 355 aaPredicted RBP14.85□□□□□ -0.03
LIMS2-217ENST00000545738 UBQLN3Q9H347 655 aa14.85□□□□□ -0.03
LIMS2-217ENST00000545738 MTHFD2LQ9H903 347 aaPredicted RBP14.85□□□□□ -0.03
LIMS2-217ENST00000545738 EGFL7Q9UHF1 273 aa14.85□□□□□ -0.03
LIMS2-217ENST00000545738 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.85□□□□□ -0.03
LIMS2-217ENST00000545738 DNAJC13O75165 2243 aa14.85□□□□□ -0.03
LIMS2-217ENST00000545738 ELOVL7A1L3X0 281 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 SERINC4A6NH21 518 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 FAM166BA8MTA8 275 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 SCDO00767 359 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 PGM1P36871 562 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 NCALDP61601 193 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 EEF1A1P68104 462 aaKnown RBP14.84□□□□□ -0.03
LIMS2-217ENST00000545738 FOXK1P85037 733 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 FXNQ16595 210 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 PRAMEF8Q5VWM4 474 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 PRAMEF7Q5VXH5 474 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 RPUSD3Q6P087 351 aaKnown RBP14.84□□□□□ -0.03
LIMS2-217ENST00000545738 BNC2Q6ZN30 1099 aaPredicted RBP14.84□□□□□ -0.03
LIMS2-217ENST00000545738 CLIP4Q8N3C7 705 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 FAM71CQ8NEG0 241 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 OR52P1PQ8NH57 321 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 BBS10Q8TAM1 723 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 SH3YL1Q96HL8 342 aaPredicted RBP14.84□□□□□ -0.03
LIMS2-217ENST00000545738 SPATA9Q9BWV2 254 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 PCDHAC1Q9H158 963 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 ZNF703Q9H7S9 590 aaPredicted RBP14.84□□□□□ -0.03
LIMS2-217ENST00000545738 MED11Q9P086 117 aa14.84□□□□□ -0.03
LIMS2-217ENST00000545738 C5orf58C9J3I9 102 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 KLRC4-KLRK1H3BQV0 150 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 NDUFB5O43674 189 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 DNAJA2O60884 412 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 MFN2O95140 757 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 RASAL1O95294 804 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 PABPC4LP0CB38 370 aaKnown RBP14.83□□□□□ -0.03
LIMS2-217ENST00000545738 NID1P14543 1247 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 ETS2P15036 469 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 MST1P26927 711 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 DUSP7Q16829 419 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 TBCELQ5QJ74 424 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 MRPL2Q5T653 305 aaKnown RBP14.83□□□□□ -0.03
LIMS2-217ENST00000545738 TIGD3Q6B0B8 471 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 CISD2Q8N5K1 135 aaKnown RBP14.83□□□□□ -0.03
LIMS2-217ENST00000545738 TMEM251Q8N6I4 163 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 METTL25Q8N6Q8 603 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 FADS6Q8N9I5 356 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 SMYD1Q8NB12 490 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 GPR32P1Q8NGA4 272 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 PHOSPHO1Q8TCT1 267 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 CNOT9Q92600 299 aaKnown RBP14.83□□□□□ -0.03
LIMS2-217ENST00000545738 SNRNP40Q96DI7 357 aaKnown RBP14.83□□□□□ -0.03
LIMS2-217ENST00000545738 KCTD14Q9BQ13 255 aaPredicted RBP14.83□□□□□ -0.03
LIMS2-217ENST00000545738 HOXD1Q9GZZ0 328 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 ZFP64Q9NPA5 681 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 CALML5Q9NZT1 146 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 SUCOQ9UBS9 1254 aaKnown RBP14.83□□□□□ -0.03
LIMS2-217ENST00000545738 ANGPT4Q9Y264 503 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 ZNF443Q9Y2A4 671 aaPredicted RBP14.83□□□□□ -0.03
LIMS2-217ENST00000545738 CARD8Q9Y2G2 431 aa14.83□□□□□ -0.03
LIMS2-217ENST00000545738 IGLV3-32A0A0A0MS00 114 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 M0QX08 132 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 FRS3O43559 492 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 SNX4O95219 450 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 UBTFL6P0CB48 400 aaPredicted RBP14.83□□□□□ -0.04
LIMS2-217ENST00000545738 HSD17B1P14061 328 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 HPGDP15428 266 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 MAGEA5P43359 124 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 MLLT10P55197 1068 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 RPP38P78345 283 aaKnown RBP14.83□□□□□ -0.04
LIMS2-217ENST00000545738 KCNJ10P78508 379 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 SKP2Q13309 424 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 VEZF1Q14119 521 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 CCDC80Q76M96 950 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 SIAH3Q8IW03 269 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 OR2M3Q8NG83 312 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 OR10Q1Q8NGQ4 319 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 ZNF597Q96LX8 424 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 BTBD10Q9BSF8 475 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 CADM1Q9BY67 442 aaKnown RBP14.83□□□□□ -0.04
LIMS2-217ENST00000545738 DNAJB12Q9NXW2 375 aaKnown RBP14.83□□□□□ -0.04
LIMS2-217ENST00000545738 ICAM5Q9UMF0 924 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 LIPGQ9Y5X9 500 aa14.83□□□□□ -0.04
LIMS2-217ENST00000545738 CDHR4A6H8M9 788 aa14.82□□□□□ -0.04
LIMS2-217ENST00000545738 TMEM247A6NEH6 219 aa14.82□□□□□ -0.04
LIMS2-217ENST00000545738 ZNHIT1O43257 154 aa14.82□□□□□ -0.04
LIMS2-217ENST00000545738 IL7RP16871 459 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms