RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 OR51V1Q9H2C8 321 aa14.71□□□□□ -0.06
LDLR-204ENST00000545707 NLGN3Q9NZ94 848 aa14.71□□□□□ -0.06
LDLR-204ENST00000545707 CALML5Q9NZT1 146 aa14.71□□□□□ -0.06
LDLR-204ENST00000545707 PRKAG2Q9UGJ0 569 aa14.71□□□□□ -0.06
LDLR-204ENST00000545707 J3QRE1 110 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 PEX12O00623 359 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 CLUP10909 449 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 PAICSP22234 425 aaKnown RBP14.7□□□□□ -0.06
LDLR-204ENST00000545707 AK4P27144 223 aaPredicted RBP14.7□□□□□ -0.06
LDLR-204ENST00000545707 HTR2AP28223 471 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 TEAD1P28347 426 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 EVI2BP34910 448 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 SEC13P55735 322 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 RPS7P62081 194 aaKnown RBP14.7□□□□□ -0.06
LDLR-204ENST00000545707 E2F1Q01094 437 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 SGCGQ13326 291 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 MZT2AQ6P582 158 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 THSD4Q6ZMP0 1018 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 TRILQ7L0X0 811 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 RD3Q7Z3Z2 195 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 PEX5LQ8IYB4 626 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 GJD3Q8N144 294 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 ACBD7Q8N6N7 88 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 MTHFD2LQ9H903 347 aaPredicted RBP14.7□□□□□ -0.06
LDLR-204ENST00000545707 ADAP2Q9NPF8 381 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 ACOXLQ9NUZ1 547 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 BABAM2Q9NXR7 383 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 FBXL4Q9UKA2 621 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 CLEC4AQ9UMR7 237 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 A0A1W2PQU0 124 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 OR5F1O95221 314 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 EIF4EP06730 217 aaKnown RBP14.7□□□□□ -0.06
LDLR-204ENST00000545707 CMPK1P30085 196 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 SLC3A1Q07837 685 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 ZNF425Q6IV72 752 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 HEPHL1Q6MZM0 1159 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 RTL10Q7L3V2 364 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 LRRC25Q8N386 305 aaPredicted RBP14.7□□□□□ -0.06
LDLR-204ENST00000545707 DNAJC5GQ8N7S2 189 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 BMPERQ8N8U9 685 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 OR14C36Q8NHC7 312 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 RIPOR3Q96MK2 946 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 ANKRD19PQ9H560 264 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 SLA2Q9H6Q3 261 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 ASB6Q9NWX5 421 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 TBC1D29Q9UFV1 150 aa14.7□□□□□ -0.06
LDLR-204ENST00000545707 LINC01553A4QN01 128 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 UNC119BA6NIH7 251 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 ERVH48-1M5A8F1 160 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 IFI30P13284 250 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 ARSBP15848 533 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 NOS3P29474 1203 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 CLDN20P56880 219 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 GPLD1P80108 840 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 CEBPEQ15744 281 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 NIPAL3Q6P499 406 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 SAMD12Q8N8I0 201 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 CYB561A3Q8NBI2 242 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 OR4M1Q8NGD0 313 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 FANK1Q8TC84 345 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 LCN9Q8WX39 176 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 PTP4A1Q93096 173 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 ZC3HAV1LQ96H79 300 aaKnown RBP14.69□□□□□ -0.06
LDLR-204ENST00000545707 SDF2Q99470 211 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 TIMM29Q9BSF4 260 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 CAPN10Q9HC96 672 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 FGF22Q9HCT0 170 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 SIDT1Q9NXL6 827 aaKnown RBP14.69□□□□□ -0.06
LDLR-204ENST00000545707 KCNE5Q9UJ90 142 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 POLHQ9Y253 713 aa14.69□□□□□ -0.06
LDLR-204ENST00000545707 A0A1W2PPK0 400 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 DAPL1A0PJW8 107 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 INMT-MINDY4F8WBC2 141 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 RNGTTO60942 597 aaKnown RBP14.68□□□□□ -0.06
LDLR-204ENST00000545707 RGS9O75916 674 aaPredicted RBP14.68□□□□□ -0.06
LDLR-204ENST00000545707 HMGN1P05114 100 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 GYPBP06028 91 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 IGFALSP35858 605 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 ACVR1BP36896 505 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 RFX3P48380 749 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 SRP9P49458 86 aaKnown RBP14.68□□□□□ -0.06
LDLR-204ENST00000545707 GZMKP49863 264 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 ACSM1Q08AH1 577 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 ADAM15Q13444 863 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 GPR176Q14439 515 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 SF3A2Q15428 464 aaKnown RBP14.68□□□□□ -0.06
LDLR-204ENST00000545707 RNASE12Q5GAN4 147 aaKnown RBP14.68□□□□□ -0.06
LDLR-204ENST00000545707 CDC73Q6P1J9 531 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 METAP1DQ6UB28 335 aaPredicted RBP14.68□□□□□ -0.06
LDLR-204ENST00000545707 MEPCEQ7L2J0 689 aaKnown RBP14.68□□□□□ -0.06
LDLR-204ENST00000545707 TCTE3Q8IZS6 198 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 GHDCQ8N2G8 530 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 SRFBP1Q8NEF9 429 aaKnown RBP14.68□□□□□ -0.06
LDLR-204ENST00000545707 CCL4L1Q8NHW4 92 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 BADQ92934 168 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 MARVELD1Q9BSK0 173 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 RAB11FIP5Q9BXF6 653 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 MED17Q9NVC6 651 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 RASD1Q9Y272 281 aa14.68□□□□□ -0.06
LDLR-204ENST00000545707 CA5BQ9Y2D0 317 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms