RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 LSM11P83369 360 aaKnown RBP eCLIP13.02□□□□□ -0.33
RTN3-214ENST00000545432 ZNF155Q12901 538 aaPredicted RBP13.02□□□□□ -0.33
RTN3-214ENST00000545432 PPA1Q15181 289 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 RAB35Q15286 201 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 TIMM23BQ5SRD1 257 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 FAM120AOSQ5T036 256 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 UBAP2Q5T6F2 1119 aaKnown RBP13.02□□□□□ -0.33
RTN3-214ENST00000545432 LIPNQ5VXI9 398 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 PPP4R4Q6NUP7 873 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 MEX3DQ86XN8 651 aaKnown RBP13.02□□□□□ -0.33
RTN3-214ENST00000545432 ZNF619Q8N2I2 560 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 TMEM151AQ8N4L1 468 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 ZNF525Q8N782 197 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 BANPQ8N9N5 519 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 OR4C3Q8NH37 302 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 FAM168AQ92567 244 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 CPNE4Q96A23 557 aaPredicted RBP13.02□□□□□ -0.33
RTN3-214ENST00000545432 ELP4Q96EB1 424 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 RNF145Q96MT1 663 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 DHRS9Q9BPW9 319 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 KLHDC3Q9BQ90 382 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 SRXN1Q9BYN0 137 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 BCO1Q9HAY6 547 aa13.02□□□□□ -0.33
RTN3-214ENST00000545432 SERTM1A2A2V5 107 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 MANBAO00462 879 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 UBFD1O14562 309 aaKnown RBP13.01□□□□□ -0.33
RTN3-214ENST00000545432 PCDH7O60245 1069 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 PRKD3O94806 890 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 ESRRBO95718 433 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 OPN1LWP04000 364 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 CSF3P09919 207 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 LINGO3P0C6S8 592 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 COX5AP20674 150 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 DDCP20711 480 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 PTNP21246 168 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 SHC1P29353 583 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 OR3A2P47893 321 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 EFNA4P52798 201 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 SQLEQ14534 574 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 SH2D4BQ5SQS7 431 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 CCDC25Q86WR0 208 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 LILRA2Q8N149 483 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 SLC43A2Q8N370 569 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 PLA2G12AQ9BZM1 189 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 C3orf14Q9HBI5 128 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 DMGDHQ9UI17 866 aaKnown RBP13.01□□□□□ -0.33
RTN3-214ENST00000545432 NFU1Q9UMS0 254 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 MGAT4BQ9UQ53 548 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 MGAM2Q2M2H8 2515 aa13.01□□□□□ -0.33
RTN3-214ENST00000545432 GXYLT2A0PJZ3 443 aa13□□□□□ -0.33
RTN3-214ENST00000545432 FAM187AA6NFU0 413 aa13□□□□□ -0.33
RTN3-214ENST00000545432 ABCD4O14678 606 aa13□□□□□ -0.33
RTN3-214ENST00000545432 NDUFB5O43674 189 aa13□□□□□ -0.33
RTN3-214ENST00000545432 NKX2-2O95096 273 aa13□□□□□ -0.33
RTN3-214ENST00000545432 OXSR1O95747 527 aaPredicted RBP13□□□□□ -0.33
RTN3-214ENST00000545432 SBK3P0C264 359 aa13□□□□□ -0.33
RTN3-214ENST00000545432 ME2P23368 584 aa13□□□□□ -0.33
RTN3-214ENST00000545432 ELK4P28324 431 aa13□□□□□ -0.33
RTN3-214ENST00000545432 TYK2P29597 1187 aa13□□□□□ -0.33
RTN3-214ENST00000545432 LCN1P31025 176 aa13□□□□□ -0.33
RTN3-214ENST00000545432 GABRA3P34903 492 aa13□□□□□ -0.33
RTN3-214ENST00000545432 HSD17B3P37058 310 aa13□□□□□ -0.33
RTN3-214ENST00000545432 EIF1P41567 113 aaKnown RBP13□□□□□ -0.33
RTN3-214ENST00000545432 CDH13P55290 713 aa13□□□□□ -0.33
RTN3-214ENST00000545432 SLC18A2Q05940 514 aa13□□□□□ -0.33
RTN3-214ENST00000545432 CALCOCO2Q13137 446 aa13□□□□□ -0.33
RTN3-214ENST00000545432 SLC29A2Q14542 456 aa13□□□□□ -0.33
RTN3-214ENST00000545432 SPIN4Q56A73 249 aa13□□□□□ -0.33
RTN3-214ENST00000545432 FAM219BQ5XKK7 198 aa13□□□□□ -0.33
RTN3-214ENST00000545432 FAM166AQ6J272 317 aa13□□□□□ -0.33
RTN3-214ENST00000545432 RPS27LQ71UM5 84 aaKnown RBP13□□□□□ -0.33
RTN3-214ENST00000545432 FCRLAQ7L513 359 aa13□□□□□ -0.33
RTN3-214ENST00000545432 MUC15Q8N387 334 aa13□□□□□ -0.33
RTN3-214ENST00000545432 RFLNBQ8N5W9 214 aa13□□□□□ -0.33
RTN3-214ENST00000545432 MSI2Q96DH6 328 aaKnown RBP13□□□□□ -0.33
RTN3-214ENST00000545432 APIPQ96GX9 242 aa13□□□□□ -0.33
RTN3-214ENST00000545432 BBS4Q96RK4 519 aa13□□□□□ -0.33
RTN3-214ENST00000545432 ACPTQ9BZG2 426 aa13□□□□□ -0.33
RTN3-214ENST00000545432 GLIPR2Q9H4G4 154 aa13□□□□□ -0.33
RTN3-214ENST00000545432 MANSC1Q9H8J5 431 aa13□□□□□ -0.33
RTN3-214ENST00000545432 TIGARQ9NQ88 270 aa13□□□□□ -0.33
RTN3-214ENST00000545432 KCNS2Q9ULS6 477 aa13□□□□□ -0.33
RTN3-214ENST00000545432 A0A1W2PQD3 144 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 OR5H1A6NKK0 313 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 RGS14O43566 566 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 SPRY1O43609 319 aaPredicted RBP12.99□□□□□ -0.33
RTN3-214ENST00000545432 OR4F21O95013 312 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 KCNH1O95259 989 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 KRT6AP02538 564 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 KRT6BP04259 564 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 TIA1P31483 386 aaKnown RBP eCLIP12.99□□□□□ -0.33
RTN3-214ENST00000545432 MAGEA4P43358 317 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 KRT6CP48668 564 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 NCBP2P52298 156 aaKnown RBP eCLIP12.99□□□□□ -0.33
RTN3-214ENST00000545432 ZNHIT3Q15649 155 aaPredicted RBP12.99□□□□□ -0.33
RTN3-214ENST00000545432 GLE1Q53GS7 698 aaKnown RBP12.99□□□□□ -0.33
RTN3-214ENST00000545432 EXOSC6Q5RKV6 272 aaKnown RBP12.99□□□□□ -0.33
RTN3-214ENST00000545432 FAM71E1Q6IPT2 247 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 ZNF544Q6NX49 715 aa12.99□□□□□ -0.33
RTN3-214ENST00000545432 TMEM107Q6UX40 140 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms